Rewiring yeast metabolism to synthesize products beyond ethanol

FV Gambacorta, JJ Dietrich, Q Yan… - Current opinion in chemical …, 2020 - Elsevier
Saccharomyces cerevisiae, Baker's yeast, is the industrial workhorse for producing ethanol
and the subject of substantial metabolic engineering research in both industry and …

Benchmarking real-time monitoring strategies for ethanol production from lignocellulosic biomass

PC Lopez, H Feldman, M Mauricio-Iglesias… - Biomass and …, 2019 - Elsevier
The goal of this paper is to review and critically assess different methods to monitor key
process variables for ethanol production from lignocellulosic biomass. Because cellulose …

Fumarate production with Rhizopus oryzae: utilising the Crabtree effect to minimise ethanol by-product formation

RM Swart, F Le Roux, A Naude, NW de Jongh… - Biotechnology for …, 2020 - Springer
Background The four-carbon dicarboxylic acids of the tricarboxylic acid cycle (malate,
fumarate and succinate) remain promising bio-based alternatives to various precursor …

A robust hybrid observer for monitoring high-cell density cultures exhibiting overflow metabolism

L Barzaga-Martell, MA Duarte-Mermoud… - Journal of Process …, 2021 - Elsevier
This work proposes a hybrid observer based on an asymptotic observer combined with an
extended Kalman filter applied to high-density cultures of S. cerivisiae. The observer …

Control of specific growth rate in fed-batch bioprocesses: novel controller design for improved noise management

Y Brignoli, B Freeland, D Cunningham, M Dabros - Processes, 2020 - mdpi.com
Accurate control of the specific growth rate (µ) of microorganisms is dependent on the ability
to quantify the evolution of biomass reliably in real time. Biomass concentration can be …

Robust control of fed-batch high-cell density cultures: a simulation-based assessment

F Ibáñez, PA Saa, L Bárzaga… - Computers & Chemical …, 2021 - Elsevier
High-cell density cultures (HCDC), prone to metabolic overflow, are typically operated in fed-
batch mode to maximize productivity. We developed a simulation-based procedure for …

Escherichia coli metabolism under short-term repetitive substrate dynamics: adaptation and trade-offs

E Vasilakou, MCM Van Loosdrecht, SA Wahl - Microbial Cell Factories, 2020 - Springer
Background Microbial metabolism is highly dependent on the environmental conditions.
Especially, the substrate concentration, as well as oxygen availability, determine the …

Accelerated Bioprocess Development of Endopolygalacturonase-Production with Saccharomyces cerevisiae Using Multivariate Prediction in a 48 Mini-Bioreactor …

A Sawatzki, S Hans, H Narayanan, B Haby, N Krausch… - Bioengineering, 2018 - mdpi.com
Mini-bioreactor systems enabling automatized operation of numerous parallel cultivations
are a promising alternative to accelerate and optimize bioprocess development allowing for …

Black glucose-releasing silicon elastomer rings for fed-batch operation allow measurement of the oxygen transfer rate from the top and optical signals from the bottom …

S Sparviero, L Barth, T Keil, C Dinter, C Berg… - BMC …, 2023 - Springer
Background In industrial microbial biotechnology, fed-batch processes are frequently used
to avoid undesirable biological phenomena, such as substrate inhibition or overflow …

Cowpea NAC Transcription Factors Positively Regulate Cellular Stress Response and Balance Energy Metabolism in Yeast via Reprogramming of Biosynthetic …

R Srivastava, L Sahoo - ACS Synthetic Biology, 2021 - ACS Publications
Yeast is a dominant host for recombinant production of heterologous proteins, high-value
biochemical compounds, and microbial fermentation. During bioprocess operations, pH …