Diversity and emerging roles of enhancer RNA in regulation of gene expression and cell fate

PR Arnold, AD Wells, XC Li - Frontiers in cell and developmental …, 2020 - frontiersin.org
Enhancers are cis-regulatory elements in the genome that cooperate with promoters to
control target gene transcription. Unlike promoters, enhancers are not necessarily adjacent …

Balancing the immune response in the brain: IL-10 and its regulation

D Lobo-Silva, GM Carriche, AG Castro… - Journal of …, 2016 - Springer
Background The inflammatory response is critical to fight insults, such as pathogen invasion
or tissue damage, but if not resolved often becomes detrimental to the host. A growing body …

Histone deacetylase OsHDA716 represses rice chilling tolerance by deacetylating OsbZIP46 to reduce its transactivation function and protein stability

Y Sun, Z Xie, L Jin, T Qin, C Zhan, J Huang - The Plant Cell, 2024 - academic.oup.com
Low temperature is a major environmental factor limiting plant growth and crop production.
Epigenetic regulation of gene expression is important for plant adaptation to environmental …

The role of epigenetics in type 1 diabetes

ST Jerram, MN Dang, RD Leslie - Current diabetes reports, 2017 - Springer
Abstract Purpose of Review Epigenetics is defined as mitotically heritable changes in gene
expression that do not directly alter the DNA sequence. By implication, such epigenetic …

Epigenetic regulation in etiology of type 1 diabetes mellitus

M Cerna - International journal of molecular sciences, 2019 - mdpi.com
Type 1 diabetes mellitus (T1DM) is caused by an autoimmune destruction of the pancreatic
β-cells, a process in which autoreactive T cells play a pivotal role, and it is characterized by …

Molecular modulators of the circadian clock: lessons from flies and mice

L Mendoza-Viveros, P Bouchard-Cannon… - Cellular and Molecular …, 2017 - Springer
Circadian timekeeping is a ubiquitous mechanism that enables organisms to maintain
temporal coordination between internal biological processes and time of the local …

The role of long non-coding RNAs in hepatocarcinogenesis

M Lanzafame, G Bianco, LM Terracciano… - International journal of …, 2018 - mdpi.com
Whole-transcriptome analyses have revealed that a large proportion of the human genome
is transcribed in non-protein-coding transcripts, designated as long non-coding RNAs …

An explainable artificial intelligence approach for decoding the enhancer histone modifications code and identification of novel enhancers in Drosophila

JC Wolfe, LA Mikheeva, H Hagras, NR Zabet - Genome Biology, 2021 - Springer
Background Enhancers are non-coding regions of the genome that control the activity of
target genes. Recent efforts to identify active enhancers experimentally and in silico have …

LDB1-mediated enhancer looping can be established independent of mediator and cohesin

I Krivega, A Dean - Nucleic acids research, 2017 - academic.oup.com
Mechanistic studies in erythroid cells indicate that LDB1, as part of a GATA1/TAL1/LMO2
complex, brings erythroid-expressed genes into proximity with enhancers for transcription …

Molecular windows into the human brain for psychiatric disorders

G Egervari, A Kozlenkov, S Dracheva, YL Hurd - Molecular psychiatry, 2019 - nature.com
Delineating the pathophysiology of psychiatric disorders has been extremely challenging
but technological advances in recent decades have facilitated a deeper interrogation of …