The landscape of genetic content in the gut and oral human microbiome

BT Tierney, Z Yang, JM Luber, M Beaudin… - Cell host & …, 2019 - cell.com
Despite substantial interest in the species diversity of the human microbiome and its role in
disease, the scale of its genetic diversity, which is fundamental to deciphering human …

Complete vertebrate mitogenomes reveal widespread repeats and gene duplications

G Formenti, A Rhie, J Balacco, B Haase, J Mountcastle… - Genome biology, 2021 - Springer
Background Modern sequencing technologies should make the assembly of the relatively
small mitochondrial genomes an easy undertaking. However, few tools exist that address …

[HTML][HTML] Ancient mitogenomes reveal the evolutionary history and biogeography of sloths

F Delsuc, M Kuch, GC Gibb, E Karpinski… - Current Biology, 2019 - cell.com
Living sloths represent two distinct lineages of small-sized mammals that independently
evolved arboreality from terrestrial ancestors. The six extant species are the survivors of an …

Palaeoproteomics resolves sloth relationships

S Presslee, GJ Slater, F Pujos, AM Forasiepi… - Nature Ecology & …, 2019 - nature.com
The living tree sloths Choloepus and Bradypus are the only remaining members of Folivora,
a major xenarthran radiation that occupied a wide range of habitats in many parts of the …

Reassessing the phylogeny and divergence times of sloths (Mammalia: Pilosa: Folivora), exploring alternative morphological partitioning and dating models

DM Casali, A Boscaini, TJ Gaudin… - Zoological Journal of …, 2022 - academic.oup.com
Phylogenetic relationships among sloths (Folivora) have been extensively studied in the
past few decades using maximum parsimony approaches. Recently, Bayesian phylogenetic …

Bayesian total-evidence dating revisits sloth phylogeny and biogeography: a cautionary tale on morphological clock analyses

JV Tejada, PO Antoine, P Münch, G Billet… - Systematic …, 2024 - academic.oup.com
Combining morphological and molecular characters through Bayesian total-evidence dating
allows inferring the phylogenetic and timescale framework of both extant and fossil taxa …

Digging for the spiny rat and hutia phylogeny using a gene capture approach, with the description of a new mammal subfamily

M Courcelle, MK Tilak, YLR Leite, EJP Douzery… - Molecular Phylogenetics …, 2019 - Elsevier
Next generation sequencing (NGS) and genomic database mining allow biologists to gather
and select large molecular datasets well suited to address phylogenomics and molecular …

Ecological selectivity and the evolution of mammalian substrate preference across the K–Pg boundary

JJ Hughes, JS Berv, SGB Chester… - Ecology and …, 2021 - Wiley Online Library
Abstract The Cretaceous–Paleogene (K–Pg) mass extinction 66 million years ago was
characterized by a worldwide ecological catastrophe and rapid species turnover. Large …

Na+/Cl cotransporter 2 is not fish-specific and is widely found in amphibians, non-avian reptiles, and select mammals

T Motoshima, A Nagashima, C Ota… - Physiological …, 2023 - journals.physiology.org
Solute carrier 12 (Slc12) is a family of electroneutral cation-coupled chloride (Cl−)
cotransporters. Na+/K+/2Cl−(Nkcc) and Na+/Cl− cotransporters (Ncc) belong to the …

Genomic data suggest parallel dental vestigialization within the xenarthran radiation

CA Emerling, GC Gibb, MK Tilak… - Peer Community …, 2023 - peercommunityjournal.org
The recent influx of genomic data has provided greater insights into the molecular basis for
regressive evolution, or vestigialization, through gene loss and pseudogenization. As such …