In vitro selection of aptamers and their applications

MC DeRosa, A Lin, P Mallikaratchy… - Nature Reviews …, 2023 - nature.com
The introduction of the in vitro evolution method known as SELEX (systematic evolution of
ligands by exponential enrichment) more than 30 years ago led to the conception of …

Aptamer–protein interactions: from regulation to biomolecular detection

C Ji, J Wei, L Zhang, X Hou, J Tan, Q Yuan… - Chemical …, 2023 - ACS Publications
Serving as the basis of cell life, interactions between nucleic acids and proteins play
essential roles in fundamental cellular processes. Aptamers are unique single-stranded …

Strategies to manipulate the performance of aptamers in SELEX, post-SELEX and microenvironment

S Qi, N Duan, IM Khan, X Dong, Y Zhang, S Wu… - Biotechnology …, 2022 - Elsevier
Aptamers are short single-stranded DNA or RNA oligonucleotides isolated from randomized
libraries, presenting high affinity and specificity toward targets with similar to antibodies …

Wearable chemical sensors for biomarker discovery in the omics era

JR Sempionatto, JA Lasalde-Ramírez… - Nature Reviews …, 2022 - nature.com
Biomarkers are crucial biological indicators in medical diagnostics and therapy. However,
the process of biomarker discovery and validation is hindered by a lack of standardized …

Nucleic acid-based wearable and implantable electrochemical sensors

C Ye, H Lukas, M Wang, Y Lee, W Gao - Chemical Society Reviews, 2024 - pubs.rsc.org
The rapid advancements in nucleic acid-based electrochemical sensors for implantable and
wearable applications have marked a significant leap forward in the domain of personal …

Conformal prediction under feedback covariate shift for biomolecular design

C Fannjiang, S Bates… - Proceedings of the …, 2022 - National Acad Sciences
Many applications of machine-learning methods involve an iterative protocol in which data
are collected, a model is trained, and then outputs of that model are used to choose what …

Computational tools for aptamer identification and optimization

D Sun, M Sun, J Zhang, X Lin, Y Zhang, F Lin… - TrAC Trends in …, 2022 - Elsevier
Aptamers are single-stranded DNA or RNA oligonucleotides that can selectively bind to a
specific target. They are generally obtained by SELEX, but the procedure is challenging and …

Directed evolution of aptamer discovery technologies

D Wu, CKL Gordon, JH Shin… - Accounts of Chemical …, 2022 - ACS Publications
Conspectus Although antibodies are a powerful tool for molecular biology and clinical
diagnostics, there are many emerging applications for which nucleic acid-based aptamers …

Recent trends in RNA informatics: a review of machine learning and deep learning for RNA secondary structure prediction and RNA drug discovery

K Sato, M Hamada - Briefings in Bioinformatics, 2023 - academic.oup.com
Computational analysis of RNA sequences constitutes a crucial step in the field of RNA
biology. As in other domains of the life sciences, the incorporation of artificial intelligence …

Recent advances in electrochemical nanomaterial-based aptasensors for the detection of cancer biomarkers

M Negahdary, L Angnes - Talanta, 2023 - Elsevier
New technologies have provided suitable tools for rapid diagnosis of cancer which can
reduce treatment costs and even increase patients' survival rates. Recently, the …