A Review of Holography in the Aquatic Sciences: In situ Characterization of Particles, Plankton, and Small Scale Biophysical Interactions

AR Nayak, E Malkiel, MN McFarland… - Frontiers in Marine …, 2021 - frontiersin.org
The characterization of particle and plankton populations, as well as microscale biophysical
interactions, is critical to several important research areas in oceanography and limnology. A …

A review of mechanically stimulated bioluminescence of marine plankton and its applications

F Letendre, M Twardowski, A Blackburn… - Frontiers in Marine …, 2024 - frontiersin.org
Bioluminescence is ubiquitous in marine ecosystems and found in uni-and multicellular
organisms. Bioluminescent displays can be used to deter predators, attract mates, and lure …

Identification of microplastics based on the fractal properties of their holographic fingerprint

V Bianco, D Pirone, P Memmolo, F Merola… - ACS …, 2021 - ACS Publications
Water plastic pollution is a serious problem affecting sealife, marine habitats, and the food
chain. Artificial intelligence-enabled coherent imaging has recently shown exciting …

In-domain versus out-of-domain transfer learning in plankton image classification

A Maracani, VP Pastore, L Natale, L Rosasco… - Scientific Reports, 2023 - nature.com
Plankton microorganisms play a huge role in the aquatic food web. Recently, it has been
proposed to use plankton as a biosensor, since they can react to even minimal perturbations …

Plankton classification with high-throughput submersible holographic microscopy and transfer learning

L MacNeil, S Missan, J Luo, T Trappenberg… - BMC Ecology and …, 2021 - Springer
Background Plankton are foundational to marine food webs and an important feature for
characterizing ocean health. Recent developments in quantitative imaging devices provide …

Deep learning classification of lake zooplankton

SP Kyathanahally, T Hardeman, E Merz… - Frontiers in …, 2021 - frontiersin.org
Plankton are effective indicators of environmental change and ecosystem health in
freshwater habitats, but collection of plankton data using manual microscopic methods is …

Combining multi-marker metabarcoding and digital holography to describe eukaryotic plankton across the Newfoundland Shelf

L MacNeil, DK Desai, M Costa, J LaRoche - Scientific Reports, 2022 - nature.com
The planktonic diversity throughout the oceans is vital to ecosystem functioning and linked to
environmental change. Plankton monitoring tools have advanced considerably with high …

Survey of automatic plankton image recognition: challenges, existing solutions and future perspectives

T Eerola, D Batrakhanov, NV Barazandeh… - Artificial Intelligence …, 2024 - Springer
Planktonic organisms including phyto-, zoo-, and mixoplankton are key components of
aquatic ecosystems and respond quickly to changes in the environment, therefore their …

In situ imaging of a kleptoplastidic ciliate thin layer indicates traditional sampling underestimates oceanic mixotroph biomass

R Barua, L Nyman, B Guo, MD Johnson… - … Earth & Environment, 2024 - nature.com
Planktonic mixotrophs, including ciliates, are abundant, yet understudied, mediators of
primary and secondary production in aquatic food webs. Here, we report high-resolution in …

Snow particle analyzer for simultaneous measurements of snow density and morphology

J Li, M Guala, J Hong - Journal of Geophysical Research …, 2023 - Wiley Online Library
The detailed characterization of snow particles is critical for understanding the snow settling
behavior and modeling the ground snow accumulation for various applications such as …