The role of goblet cells and mucus in intestinal homeostasis
JK Gustafsson, MEV Johansson - Nature reviews Gastroenterology & …, 2022 - nature.com
The intestinal tract faces numerous challenges that require several layers of defence. The
tight epithelium forms a physical barrier that is further protected by a mucus layer, which …
tight epithelium forms a physical barrier that is further protected by a mucus layer, which …
Cell fate specification and differentiation in the adult mammalian intestine
Intestinal stem cells at the bottom of crypts fuel the rapid renewal of the different cell types
that constitute a multitasking tissue. The intestinal epithelium facilitates selective uptake of …
that constitute a multitasking tissue. The intestinal epithelium facilitates selective uptake of …
A human cell atlas of fetal gene expression
INTRODUCTION A reference atlas of human cell types is a major goal for the field. Here, we
set out to generate single-cell atlases of both gene expression (this study) and chromatin …
set out to generate single-cell atlases of both gene expression (this study) and chromatin …
[HTML][HTML] Microscopic examination of spatial transcriptome using Seq-Scope
Spatial barcoding technologies have the potential to reveal histological details of
transcriptomic profiles; however, they are currently limited by their low resolution. Here, we …
transcriptomic profiles; however, they are currently limited by their low resolution. Here, we …
Homeostatic mini-intestines through scaffold-guided organoid morphogenesis
Epithelial organoids, such as those derived from stem cells of the intestine, have great
potential for modelling tissue and disease biology,,–. However, the approaches that are …
potential for modelling tissue and disease biology,,–. However, the approaches that are …
Differential abundance testing on single-cell data using k-nearest neighbor graphs
Current computational workflows for comparative analyses of single-cell datasets typically
use discrete clusters as input when testing for differential abundance among experimental …
use discrete clusters as input when testing for differential abundance among experimental …
[HTML][HTML] Spatiotemporal analysis of human intestinal development at single-cell resolution
D Fawkner-Corbett, A Antanaviciute, K Parikh… - Cell, 2021 - cell.com
Development of the human intestine is not well understood. Here, we link single-cell RNA
sequencing and spatial transcriptomics to characterize intestinal morphogenesis through …
sequencing and spatial transcriptomics to characterize intestinal morphogenesis through …
[HTML][HTML] Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma
N Kim, HK Kim, K Lee, Y Hong, JH Cho… - Nature …, 2020 - nature.com
Advanced metastatic cancer poses utmost clinical challenges and may present molecular
and cellular features distinct from an early-stage cancer. Herein, we present single-cell …
and cellular features distinct from an early-stage cancer. Herein, we present single-cell …
Single-cell atlases: shared and tissue-specific cell types across human organs
R Elmentaite, C Domínguez Conde, L Yang… - Nature Reviews …, 2022 - nature.com
The development of single-cell and spatial transcriptomics methods was instrumental in the
conception of the Human Cell Atlas initiative, which aims to generate an integrated map of …
conception of the Human Cell Atlas initiative, which aims to generate an integrated map of …
Disease-associated astrocytes in Alzheimer's disease and aging
N Habib, C McCabe, S Medina, M Varshavsky… - Nature …, 2020 - nature.com
The role of non-neuronal cells in Alzheimer's disease progression has not been fully
elucidated. Using single-nucleus RNA sequencing, we identified a population of disease …
elucidated. Using single-nucleus RNA sequencing, we identified a population of disease …