[HTML][HTML] Epigenetic drivers of tumourigenesis and cancer metastasis
Since the completion of the first human genome sequence and the advent of next generation
sequencing technologies, remarkable progress has been made in understanding the …
sequencing technologies, remarkable progress has been made in understanding the …
Methods for analysis of specific DNA methylation status
MJ Pajares, C Palanca-Ballester, R Urtasun… - Methods, 2021 - Elsevier
Methylation of CpG dinucleotides plays a crucial role in the regulation of gene expression
and therefore in the development of different pathologies. Aberrant methylation has been …
and therefore in the development of different pathologies. Aberrant methylation has been …
[HTML][HTML] Marked global DNA hypomethylation is associated with constitutive PD-L1 expression in melanoma
Constitutive expression of the immune checkpoint, PD-L1, inhibits anti-tumor immune
responses in cancer, although the factors involved in PD-L1 regulation are poorly …
responses in cancer, although the factors involved in PD-L1 regulation are poorly …
Passing experiences on to future generations: endocrine disruptors and transgenerational inheritance of epimutations in brain and sperm
All animals have body burdens of polychlorinated biphenyls (PCBs) despite their ban
decades ago. These and modern endocrine-disrupting chemicals (EDCs) such as the …
decades ago. These and modern endocrine-disrupting chemicals (EDCs) such as the …
Dynamic epigenetic changes during a relapse and recovery cycle in myalgic encephalomyelitis/chronic fatigue syndrome
AM Helliwell, PA Stockwell, CD Edgar… - International Journal of …, 2022 - mdpi.com
Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) is a complex disease with
variable severity. Patients experience frequent relapses where symptoms increase in …
variable severity. Patients experience frequent relapses where symptoms increase in …
Comparison of global DNA methylation patterns in human melanoma tissues and their derivative cell lines
EJ Rodger, SN Almomani, JL Ludgate, PA Stockwell… - Cancers, 2021 - mdpi.com
Simple Summary Cancer cell lines are a defined population of cells, originally sourced from
tumour tissue, that can be maintained in culture for an extended period of time. They are a …
tumour tissue, that can be maintained in culture for an extended period of time. They are a …
DNA Methylome and Transcriptome Maps of Primary Colorectal Cancer and Matched Liver Metastasis
P Ajithkumar, G Gimenez, PA Stockwell, S Almomani… - Data, 2023 - mdpi.com
Sequencing-based genome-wide DNA methylation, gene expression studies and
associated data on paired colorectal cancer (CRC) primary and liver metastasis are very …
associated data on paired colorectal cancer (CRC) primary and liver metastasis are very …
A streamlined method for analysing genome-wide DNA methylation patterns from low amounts of FFPE DNA
JL Ludgate, J Wright, PA Stockwell, IM Morison… - BMC medical …, 2017 - Springer
Background Formalin fixed paraffin embedded (FFPE) tumor samples are a major source of
DNA from patients in cancer research. However, FFPE is a challenging material to work with …
DNA from patients in cancer research. However, FFPE is a challenging material to work with …
Changes in DNA methylation profiles of myalgic encephalomyelitis/chronic fatigue syndrome patients reflect systemic dysfunctions
AM Helliwell, EC Sweetman, PA Stockwell… - Clinical …, 2020 - Springer
Abstract Background Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) is a
lifelong debilitating disease with a complex pathology not yet clearly defined. Susceptibility …
lifelong debilitating disease with a complex pathology not yet clearly defined. Susceptibility …
DMAP2: A Pipeline for Analysis of Whole‐Genome‐Scale DNA Methylation Sequencing Data
PA Stockwell, EJ Rodger, G Gimenez… - Current …, 2024 - Wiley Online Library
DNA methylation is well‐established as a major epigenetic mechanism that can control
gene expression and is involved in both normal development and disease. Analysis of high …
gene expression and is involved in both normal development and disease. Analysis of high …