[PDF][PDF] Collaboro: a collaborative (meta) modeling tool
JLC Izquierdo, J Cabot - PeerJ Computer Science, 2016 - peerj.com
Motivation Scientists increasingly rely on intelligent information systems to help them in their
daily tasks, in particular for managing research objects, like publications or datasets. The …
daily tasks, in particular for managing research objects, like publications or datasets. The …
Vascular peroxidase 1: a novel enzyme in promoting oxidative stress in cardiovascular system
QL Ma, GG Zhang, J Peng - Trends in cardiovascular medicine, 2013 - Elsevier
Vascular peroxidase 1 (VPO1) is a recently identified novel family member of peroxidases in
cardiovascular system. As an enzyme that is downstream of NADPH oxidases (NOX), VPO1 …
cardiovascular system. As an enzyme that is downstream of NADPH oxidases (NOX), VPO1 …
Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome
Many microbes in complex competitive environments share genes for acquiring and utilising
nutrients, questioning whether niche specialisation exists and if so, how it is maintained. We …
nutrients, questioning whether niche specialisation exists and if so, how it is maintained. We …
Expansion and evolution of thaumatin-like protein (TLP) gene family in six plants
J Cao, Y Lv, Z Hou, X Li, L Ding - Plant growth regulation, 2016 - Springer
Thaumatin-like protein (TLP) is one of pathogenesis-related protein family, which plays an
important role in plant defense system. While its origin and expansion is unknown in plants …
important role in plant defense system. While its origin and expansion is unknown in plants …
[HTML][HTML] Conserved cysteine residues provide a protein-protein interaction surface in dual oxidase (DUOX) proteins
JL Meitzler, S Hinde, B Bánfi, WM Nauseef… - Journal of Biological …, 2013 - ASBMB
Intramolecular disulfide bond formation is promoted in oxidizing extracellular and
endoplasmic reticulum compartments and often contributes to protein stability and function …
endoplasmic reticulum compartments and often contributes to protein stability and function …
Evolution of the eyes of vipers with and without infrared-sensing pit organs
DJ Gower, FL Sampaio, L Peichl… - Biological Journal of …, 2019 - academic.oup.com
We examined lens and brille transmittance, photoreceptors, visual pigments, and visual
opsin gene sequences of viperid snakes with and without infrared-sensing pit organs …
opsin gene sequences of viperid snakes with and without infrared-sensing pit organs …
[HTML][HTML] Molecular adaptation of telomere associated genes in mammals
CC Morgan, AM Mc Cartney, MTA Donoghue… - BMC Evolutionary …, 2013 - Springer
Background Placental mammals display a huge range of life history traits, including size,
longevity, metabolic rate and germ line generation time. Although a number of general …
longevity, metabolic rate and germ line generation time. Although a number of general …
Adaptive evolution as a predictor of species-specific innate immune response
It has been proposed that positive selection may be associated with protein functional
change. For example, human and macaque have different outcomes to HIV infection and it …
change. For example, human and macaque have different outcomes to HIV infection and it …
[PDF][PDF] VESPA: very large-scale evolutionary and selective pressure analyses
AE Webb, TA Walsh, MJ O'Connell - PeerJ Computer Science, 2017 - peerj.com
Background Large-scale molecular evolutionary analyses of protein coding sequences
requires a number of preparatory inter-related steps from finding gene families, to …
requires a number of preparatory inter-related steps from finding gene families, to …
[HTML][HTML] Surface layer proteins from virulent Clostridium difficile ribotypes exhibit signatures of positive selection with consequences for innate immune response
Background Clostridium difficile is a nosocomial pathogen prevalent in hospitals worldwide
and increasingly common in the community. Sequence differences have been shown to be …
and increasingly common in the community. Sequence differences have been shown to be …