Imputation to whole-genome sequence using multiple pig populations and its use in genome-wide association studies

S van den Berg, J Vandenplas, FA van Eeuwijk… - Genetics Selection …, 2019 - Springer
Background Use of whole-genome sequence data (WGS) is expected to improve
identification of quantitative trait loci (QTL). However, this requires imputation to WGS, often …

Physiological and genomic insight into neuroendocrine regulation of puberty in gilts

CA Lents, AN Lindo, SM Hileman… - Domestic Animal …, 2020 - Elsevier
The timing of pubertal attainment in gilts is a critical factor for pork production and is an early
indicator of future reproductive potential. Puberty, defined as age at first standing estrus in …

High-resolution association mapping of number of teats in pigs reveals regions controlling vertebral development

N Duijvesteijn, JM Veltmaat, EF Knol, B Harlizius - BMC genomics, 2014 - Springer
Background Selection pressure on the number of teats has been applied to be able to
provide enough teats for the increase in litter size in pigs. Although many QTL were …

Genome-wide association study and accuracy of genomic prediction for teat number in Duroc pigs using genotyping-by-sequencing

C Tan, Z Wu, J Ren, Z Huang, D Liu, X He… - Genetics Selection …, 2017 - Springer
Background The number of teats in pigs is related to a sow's ability to rear piglets to weaning
age. Several studies have identified genes and genomic regions that affect teat number in …

Biology and genetics of reproduction.

JP Bidanel - The genetics of the pig, 2011 - cabidigitallibrary.org
The genetics of the pig: Biology and genetics of reproduction. Page 1 ©CAB International 2011.
The Genetics of the Pig, 218 2nd Edn (eds MF Rothschild and A. Ruvinsky) Introduction …

Genetic analysis of teat number in pigs reveals some developmental pathways independent of vertebra number and several loci which only affect a specific side

GA Rohrer, DJ Nonneman - Genetics Selection Evolution, 2017 - Springer
Background Number of functional teats is an important trait in commercial swine production.
As litter size increases, the number of teats must also increase to supply nutrition to all …

A genome-wide association study reveals dominance effects on number of teats in pigs

MS Lopes, JWM Bastiaansen, B Harlizius, EF Knol… - PloS one, 2014 - journals.plos.org
Dominance has been suggested as one of the genetic mechanisms explaining heterosis.
However, using traditional quantitative genetic methods it is difficult to obtain accurate …

Genome‐wide analysis of hybridization in wild boar populations reveals adaptive introgression from domestic pig

N Mary, N Iannuccelli, G Petit, N Bonnet… - Evolutionary …, 2022 - Wiley Online Library
The admixture of domestic pig into French wild boar populations has been monitored since
the 1980s thanks to the existence of a cytogenetic difference between the two sub‐species …

Genome‐wide prediction of age at puberty and reproductive longevity in sows

JK Tart, RK Johnson, JW Bundy, NN Ferdinand… - Animal …, 2013 - Wiley Online Library
Traditional selection for sow reproductive longevity is ineffective due to low heritability and
late expression of the trait. Incorporation of DNA markers into selection programs is …

[HTML][HTML] Genomic and transcriptomic analyses reveal selection of genes for puberty in Bama Xiang pigs

Y Yang, AC Adeola, HB Xie, YP Zhang - Zoological Research, 2018 - ncbi.nlm.nih.gov
Abstract The Bama Xiang pig (BMX) is a famous early-maturing Chinese indigenous breed
with a two-end black coat. To uncover the genetic basis of the BMX phenotype, we …