Organic matter stability and lability in terrestrial and aquatic ecosystems: A chemical and microbial perspective

V Verrone, A Gupta, AE Laloo, RK Dubey… - Science of The Total …, 2023 - Elsevier
Terrestrial and aquatic ecosystems have specific carbon fingerprints and sequestration
potential, due to the intrinsic properties of the organic matter (OM), mineral content …

Use of metabolomics to quantify changes in soil microbial function in response to fertiliser nitrogen supply and extreme drought

RW Brown, DR Chadwick, H Zang, DL Jones - Soil Biology and …, 2021 - Elsevier
Climate change is expected to increase the frequency and severity of droughts in many
regions of the world. Soil health is likely to be negatively impacted by these extreme events …

Root carbon interaction with soil minerals is dynamic, leaving a legacy of microbially derived residues

RA Neurath, J Pett-Ridge, I Chu-Jacoby… - Environmental …, 2021 - ACS Publications
Minerals preserve the oldest, most persistent soil carbon, and mineral characteristics appear
to play a critical role in the formation of soil organic matter (SOM) associations. To test the …

Lipidomics of environmental microbial communities. I: Visualization of component distributions using untargeted analysis of high-resolution mass spectrometry data

NJ Bale, S Ding, EC Hopmans, MGI Arts… - Frontiers in …, 2021 - frontiersin.org
Lipids, as one of the main building blocks of cells, can provide valuable information on
microorganisms in the environment. Traditionally, gas or liquid chromatography coupled to …

Rapid remodeling of the soil lipidome in response to a drying-rewetting event

SP Couvillion, RE Danczak, D Naylor, ML Smith… - Microbiome, 2023 - Springer
Background Microbiomes contribute to multiple ecosystem services by transforming organic
matter in the soil. Extreme shifts in the environment, such as drying-rewetting cycles during …

Influence of soil depth, irrigation, and plant genotype on the soil microbiome, metaphenome, and carbon chemistry

KI Naasko, D Naylor, EB Graham, SP Couvillion… - Mbio, 2023 - Am Soc Microbiol
Climate change is causing an increase in drought in many soil ecosystems and a loss of soil
organic carbon. Calcareous soils may partially mitigate these losses via carbon capture and …

Metabolic and Microbial Profiling of Soil Microbial Community under Per-and Polyfluoroalkyl Substance (PFAS) Stress

E Wu, K Wang, Z Liu, J Wang, H Yan… - Environmental …, 2023 - ACS Publications
Per-and polyfluoroalkyl substances (PFAS) represent significant stress to organisms and are
known to disrupt microbial community structure and function. Nevertheless, a detailed …

Nitrogen and sulfur for phosphorus: Lipidome adaptation of anaerobic sulfate-reducing bacteria in phosphorus-deprived conditions

S Ding, V Grossi, EC Hopmans… - Proceedings of the …, 2024 - National Acad Sciences
Understanding how microbial lipidomes adapt to environmental and nutrient stress is crucial
for comprehending microbial survival and functionality. Certain anaerobic bacteria can …

Lipidomics of environmental microbial communities. II: Characterization using molecular networking and information theory

S Ding, NJ Bale, EC Hopmans, L Villanueva… - Frontiers in …, 2021 - frontiersin.org
Structurally diverse, specialized lipids are crucial components of microbial membranes and
other organelles and play essential roles in ecological functioning. The detection of such …

D2O labelling reveals synthesis of small, water-soluble metabolites in soil

CR Warren - Soil Biology and Biochemistry, 2022 - Elsevier
Small, water-soluble metabolites (eg amino acids, sugars) occupy central positions in
biogeochemical cycling, yet for most metabolites we do not know rates of de novo synthesis …