Viruses of archaea: structural, functional, environmental and evolutionary genomics

M Krupovic, V Cvirkaite-Krupovic, J Iranzo… - Virus research, 2018 - Elsevier
Viruses of archaea represent one of the most enigmatic parts of the virosphere. Most of the
characterized archaeal viruses infect extremophilic hosts and display remarkable diversity of …

Archaeal extrachromosomal genetic elements

H Wang, N Peng, SA Shah, L Huang… - … and Molecular Biology …, 2015 - Am Soc Microbiol
Research on archaeal extrachromosomal genetic elements (ECEs) has progressed rapidly
in the past decade. To date, over 60 archaeal viruses and 60 plasmids have been isolated …

Archaeal viruses: diversity, replication, and structure

N Dellas, JC Snyder, B Bolduc… - Annual Review of …, 2014 - annualreviews.org
The Archaea—and their viruses—remain the most enigmatic of life's three domains. Once
thought to inhabit only extreme environments, archaea are now known to inhabit diverse …

An overview of tyrosine site‐specific recombination: from an Flp perspective

M Jayaram, CH Ma, AH Kachroo, PA Rowley… - Mobile DNA …, 2015 - Wiley Online Library
Tyrosine family site‐specific recombinases (YRs), named after the active site tyrosine
nucleophile they utilize for DNA strand breakage, are widely distributed among prokaryotes …

A novel family of tyrosine integrases encoded by the temperate pleolipovirus SNJ2

J Wang, Y Liu, Y Liu, K Du, S Xu, Y Wang… - Nucleic acids …, 2018 - academic.oup.com
Genomes of halophilic archaea typically contain multiple loci of integrated mobile genetic
elements (MGEs). Despite the abundance of these elements, however, mechanisms …

Genomics, transcriptomics, and proteomics of SSV1 and related fusellovirus: a minireview

M Aulitto, L Martinez-Alvarez, S Fusco, Q She… - Viruses, 2022 - mdpi.com
Saccharolobus spindle-shaped virus 1 (SSV1) was one of the first viruses identified in the
archaeal kingdom. Originally isolated from a Japanese species of Saccharolobus back in …

Molecular biology of fuselloviruses and their satellites

P Contursi, S Fusco, R Cannio, Q She - Extremophiles, 2014 - Springer
Fuselloviruses, also known as Sulfolobus Spindle-shaped viruses (SSVs), are “lemon”-or
“spindle”-shaped double-stranded DNA viruses. Among them, SSV1, SSV2 and the satellite …

Archaeal tyrosine recombinases

C Badel, V Da Cunha, J Oberto - FEMS microbiology reviews, 2021 - academic.oup.com
The integration of mobile genetic elements into their host chromosome influences the
immediate fate of cellular organisms and gradually shapes their evolution. Site-specific …

Viruses of the Turriviridae: an emerging model system for studying archaeal virus-host interactions

MS Overton, RD Manuel, CM Lawrence… - Frontiers in …, 2023 - frontiersin.org
Viruses have played a central role in the evolution and ecology of cellular life since it first
arose. Investigations into viral molecular biology and ecological dynamics have propelled …

The carboxy-terminal αN helix of the archaeal XerA tyrosine recombinase is a molecular switch to control site-specific recombination

MC Serre, T El Arnaout, MA Brooks, D Durand… - PLoS …, 2013 - journals.plos.org
Tyrosine recombinases are conserved in the three kingdoms of life. Here we present the first
crystal structure of a full-length archaeal tyrosine recombinase, XerA from Pyrococcus …