[HTML][HTML] Quantum chemical package Jaguar: A survey of recent developments and unique features
Y Cao, T Balduf, MD Beachy, MC Bennett… - The Journal of …, 2024 - pubs.aip.org
This paper is dedicated to the quantum chemical package Jaguar, which is commercial
software developed and distributed by Schrödinger, Inc. We discuss Jaguar's scientific …
software developed and distributed by Schrödinger, Inc. We discuss Jaguar's scientific …
[HTML][HTML] Quantum mechanical-based strategies in drug discovery: Finding the pace to new challenges in drug design
The expansion of the chemical space to tangible libraries containing billions of
synthesizable molecules opens exciting opportunities for drug discovery, but also …
synthesizable molecules opens exciting opportunities for drug discovery, but also …
Reparameterization of GFN1-xTB for atmospheric molecular clusters: applications to multi-acid–multi-base systems
Atmospheric molecular clusters, the onset of secondary aerosol formation, are a major part
of the current uncertainty in modern climate models. Quantum chemical (QC) methods are …
of the current uncertainty in modern climate models. Quantum chemical (QC) methods are …
Multilevel Framework for Analysis of Protein Folding Involving Disulfide Bond Formation
PA Wesołowski, DJ Wales, P Pracht - The Journal of Physical …, 2024 - ACS Publications
In this study, a three-layered multicenter ONIOM approach is implemented to characterize
the naive folding pathway of bovine pancreatic trypsin inhibitor (BPTI). Each layer represents …
the naive folding pathway of bovine pancreatic trypsin inhibitor (BPTI). Each layer represents …
Overcoming the Pitfalls of Computing Reaction Selectivity from Ensembles of Transition States
R Laplaza, MD Wodrich… - The Journal of Physical …, 2024 - ACS Publications
The prediction of reaction selectivity is a challenging task for computational chemistry, not
only because many molecules adopt multiple conformations but also due to the exponential …
only because many molecules adopt multiple conformations but also due to the exponential …
Emerging Conformational-Analysis Protocols from the RTCONF55-16K Reaction Thermochemistry Conformational Benchmark Set
BB Mészáros, K Kubicskó, DD Németh… - Journal of Chemical …, 2024 - ACS Publications
RTCONF55-16K is a new, reactive conformational data set based on cost-efficient methods
to assess different conformational analysis protocols. Our reference calculations …
to assess different conformational analysis protocols. Our reference calculations …
Extension of the D3 and D4 London dispersion corrections to the full actinides series
Efficient dispersion corrections are an indispensable component of modern density
functional theory, semi-empirical quantum mechanical, and even force-field methods. In this …
functional theory, semi-empirical quantum mechanical, and even force-field methods. In this …
Modelling ligand exchange in metal complexes with machine learning potentials
Metal ions are irreplaceable in many areas of chemistry, including (bio) catalysis, self-
assembly and charge transfer processes. Yet, modelling their structural and dynamic …
assembly and charge transfer processes. Yet, modelling their structural and dynamic …
Can H2 be Superacidic? A Computational Study of Triel-Bonded Brønsted Acids
J Brzeski - The Journal of Physical Chemistry A, 2024 - ACS Publications
The abundance of XIII group element compounds in science and industry together with their
electron-deficient character gives rise to their influence on properties of the systems they …
electron-deficient character gives rise to their influence on properties of the systems they …
Elucidating the non-covalent interactions in the thiazole-carbon dioxide complexes through rotational spectroscopy and theoretical computations
The complexes formed between thiazole and carbon dioxide were studied to probe the non-
covalent bonding properties between carbon dioxide and heteroaromatic ring. The rotational …
covalent bonding properties between carbon dioxide and heteroaromatic ring. The rotational …