Control of protein stability by post-translational modifications

JM Lee, HM Hammarén, MM Savitski… - Nature …, 2023 - nature.com
Post-translational modifications (PTMs) can occur on specific amino acids localized within
regulatory domains of target proteins, which control a protein's stability. These regions …

mRNAs, proteins and the emerging principles of gene expression control

C Buccitelli, M Selbach - Nature Reviews Genetics, 2020 - nature.com
Gene expression involves transcription, translation and the turnover of mRNAs and proteins.
The degree to which protein abundances scale with mRNA levels and the implications in …

Deuterium‐and tritium‐labelled compounds: applications in the life sciences

J Atzrodt, V Derdau, WJ Kerr… - Angewandte chemie …, 2018 - Wiley Online Library
Hydrogen isotopes are unique tools for identifying and understanding biological and
chemical processes. Hydrogen isotope labelling allows for the traceless and direct …

Proteome-wide mapping of short-lived proteins in human cells

J Li, Z Cai, LP Vaites, N Shen, DC Mitchell, EL Huttlin… - Molecular cell, 2021 - cell.com
Rapid protein degradation enables cells to quickly modulate protein abundance.
Dysregulation of short-lived proteins plays essential roles in disease pathogenesis. A …

Global quantification of mammalian gene expression control

B Schwanhäusser, D Busse, N Li, G Dittmar… - Nature, 2011 - nature.com
Gene expression is a multistep process that involves the transcription, translation and
turnover of messenger RNAs and proteins. Although it is one of the most fundamental …

Neuronal ribosomes exhibit dynamic and context-dependent exchange of ribosomal proteins

CM Fusco, K Desch, AR Dörrbaum, M Wang… - Nature …, 2021 - nature.com
Owing to their morphological complexity and dense network connections, neurons modify
their proteomes locally, using mRNAs and ribosomes present in the neuropil (tissue …

A perspective on the kinetics of covalent and irreversible inhibition

JM Strelow - SLAS Discovery: Advancing Life Sciences R&D, 2017 - journals.sagepub.com
The clinical and commercial success of covalent drugs has prompted a renewed and more
deliberate pursuit of covalent and irreversible mechanisms within drug discovery. A covalent …

Extended pharmacodynamic responses observed upon PROTAC-mediated degradation of RIPK2

A Mares, AH Miah, IED Smith, M Rackham… - Communications …, 2020 - nature.com
Abstract Proteolysis-Targeting Chimeras (PROTACs) are heterobifunctional small-molecules
that can promote the rapid and selective proteasome-mediated degradation of intracellular …

[HTML][HTML] Correlation of mRNA and protein in complex biological samples

T Maier, M Güell, L Serrano - FEBS letters, 2009 - Elsevier
The correlation between mRNA and protein abundances in the cell has been reported to be
notoriously poor. Recent technological advances in the quantitative analysis of mRNA and …

The demographics of the ubiquitin system

MJ Clague, C Heride, S Urbé - Trends in cell biology, 2015 - cell.com
The ubiquitin system is a major coordinator of cellular physiology through regulation of both
protein degradation and signalling pathways. A key building block of a systems-level …