Extrachromosomal DNA amplifications in cancer

E Yi, R Chamorro González, AG Henssen… - Nature Reviews …, 2022 - nature.com
Extrachromosomal DNA (ecDNA) amplification is an important driver alteration in cancer. It
has been observed in most cancer types and is associated with worse patient outcome. The …

Extrachromosomal circular DNA: Current status and future prospects

Y Zhao, L Yu, S Zhang, X Su, X Zhou - Elife, 2022 - elifesciences.org
Extrachromosomal circular DNA (eccDNA) is a double-stranded DNA molecule found in
various organisms, including humans. In the past few decades, the research on eccDNA has …

Circular DNA in the human germline and its association with recombination

RA Henriksen, P Jenjaroenpun, IB Sjøstrøm… - Molecular cell, 2022 - cell.com
Extrachromosomal circular DNA (eccDNA) is common in somatic tissue, but its existence
and effects in the human germline are unexplored. We used microscopy, long-read DNA …

Global characterization of extrachromosomal circular DNAs in advanced high grade serous ovarian cancer

Y Cen, Y Fang, Y Ren, S Hong, W Lu, J Xu - Cell Death & Disease, 2022 - nature.com
High grade serous ovarian cancer (HGSOC) is the most aggressive subtype of ovarian
cancer and HGSOC patients often appear with metastasis, leading to the poor prognosis. Up …

Circle‐Seq reveals genomic and disease‐specific hallmarks in urinary cell‐free extrachromosomal circular DNAs

W Lv, X Pan, P Han, Z Wang, W Feng… - Clinical and …, 2022 - Wiley Online Library
Background Extrachromosomal circular deoxyribonucleic acid (eccDNA) is evolving as a
valuable biomarker, while little is known about its presence in urine. Methods Here, we …

Evaluation of efficacy of non-coding RNA in abiotic stress management of field crops: Current status and future prospective

S Hazra, D Moulick, A Mukherjee, S Sahib… - Plant Physiology and …, 2023 - Elsevier
Abiotic stresses are responsible for the major losses in crop yield all over the world. Stresses
generate harmful ROS which can impair cellular processes in plants. Therefore, plants have …

Extrachromosomal circular DNA (eccDNA): from chaos to function

S Zuo, Y Yi, C Wang, X Li, M Zhou, Q Peng… - Frontiers in cell and …, 2022 - frontiersin.org
Extrachromosomal circular DNA (eccDNA) is a type of double-stranded circular DNA that is
derived and free from chromosomes. It has a strong heterogeneity in sequence, length, and …

ecc_finder: a robust and accurate tool for detecting extrachromosomal circular DNA from sequencing data

P Zhang, H Peng, C Llauro, E Bucher… - Frontiers in plant …, 2021 - frontiersin.org
Extrachromosomal circular DNA (eccDNA) has been observed in different species for
decades, and more and more evidence shows that this specific type of DNA molecules may …

Current understanding of extrachromosomal circular DNA in cancer pathogenesis and therapeutic resistance

Y Yan, G Guo, J Huang, M Gao, Q Zhu, S Zeng… - Journal of Hematology & …, 2020 - Springer
Extrachromosomal circular DNA was recently found to be particularly abundant in multiple
human cancer cells, although its frequency varies among different tumor types. Elevated …

CRISPR FISHer enables high-sensitivity imaging of nonrepetitive DNA in living cells through phase separation-mediated signal amplification

XY Lyu, Y Deng, XY Huang, ZZ Li, GQ Fang, D Yang… - Cell Research, 2022 - nature.com
The dynamic three-dimensional structures of chromatin and extrachromosomal DNA
molecules regulate fundamental cellular processes and beyond. However, the visualization …