[PDF][PDF] Development of single nucleotide polymorphism (SNP) markers in tropical crops

Y Dwiningsih, M Rahmaningsih… - Advance Sustainable …, 2020 - researchgate.net
Understanding genetic diversity, association studies, evolution analysis, quantitative trait
loci, marker-assisted selection and genome-wide association in tropical crops are important …

SNP markers and their impact on plant breeding

J Mammadov, R Aggarwal… - … journal of plant …, 2012 - Wiley Online Library
The use of molecular markers has revolutionized the pace and precision of plant genetic
analysis which in turn facilitated the implementation of molecular breeding of crops. The last …

Development of high-density genetic maps for barley and wheat using a novel two-enzyme genotyping-by-sequencing approach

JA Poland, PJ Brown, ME Sorrells, JL Jannink - PloS one, 2012 - journals.plos.org
Advancements in next-generation sequencing technology have enabled whole genome re-
sequencing in many species providing unprecedented discovery and characterization of …

Genotyping‐by‐sequencing for plant breeding and genetics

JA Poland, TW Rife - The plant genome, 2012 - Wiley Online Library
Rapid advances in “next‐generation” DNA sequencing technology have brought the US
$1000 human (Homo sapiens) genome within reach while providing the raw sequencing …

SNP discovery through next-generation sequencing and its applications

S Kumar, TW Banks, S Cloutier - Crop Breeding, 2016 - taylorfrancis.com
Molecular markers are widely used in plant genetic research and breeding. Single
Nucleotide Polymorphisms (SNPs) are currently the marker of choice due to their large …

Genome-wide SNP detection, validation, and development of an 8K SNP array for apple

D Chagné, RN Crowhurst, M Troggio, MW Davey… - PloS one, 2012 - journals.plos.org
As high-throughput genetic marker screening systems are essential for a range of genetics
studies and plant breeding applications, the International RosBREED SNP Consortium …

Going where traditional markers have not gone before: utility of and promise for RAD sequencing in marine invertebrate phylogeography and population genomics

AM Reitzel, S Herrera, MJ Layden… - Molecular …, 2013 - Wiley Online Library
Abstract Characterization of large numbers of single‐nucleotide polymorphisms (SNP s)
throughout a genome has the power to refine the understanding of population demographic …

Genetic and genomic resources of sorghum to connect genotype with phenotype in contrasting environments

RE Boyles, ZW Brenton, S Kresovich - The Plant Journal, 2019 - Wiley Online Library
With the recent development of genomic resources and high‐throughput phenotyping
platforms, the 21st century is primed for major breakthroughs in the discovery …

Multi-omics approaches for strategic improvement of stress tolerance in underutilized crop species: a climate change perspective

M Muthamilarasan, NK Singh, M Prasad - Advances in genetics, 2019 - Elsevier
For several decades, researchers are working toward improving the “major” crops for better
adaptability and tolerance to environmental stresses. However, little or no research attention …

Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop

GM Souza, MA Van Sluys, CG Lembke, H Lee… - …, 2019 - academic.oup.com
Background Sugarcane cultivars are polyploid interspecific hybrids of giant genomes,
typically with 10–13 sets of chromosomes from 2 Saccharum species. The ploidy, hybridity …