Mechanisms of deubiquitinase specificity and regulation

TET Mevissen, D Komander - Annual review of biochemistry, 2017 - annualreviews.org
Protein ubiquitination is one of the most powerful posttranslational modifications of proteins,
as it regulates a plethora of cellular processes in distinct manners. Simple …

Post-translational modifications of histones that influence nucleosome dynamics

GD Bowman, MG Poirier - Chemical reviews, 2014 - ACS Publications
Nucleosomes are efficient DNA-packaging units. The fundamental protein unit of the
nucleosome is the histone dimer, a simple α-helical domain possessing a highly basic …

Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes

FE Reyes-Turcu, KH Ventii… - Annual review of …, 2009 - annualreviews.org
Deubiquitinating enzymes (DUBs) are proteases that process ubiquitin or ubiquitin-like gene
products, reverse the modification of proteins by a single ubiquitin (-like) protein, and …

The diverse functions of histone lysine methylation

C Martin, Y Zhang - Nature reviews Molecular cell biology, 2005 - nature.com
Covalent modifications of histone tails have fundamental roles in chromatin structure and
function. One such modification, lysine methylation, has important functions in many …

Proteasome-independent functions of ubiquitin in endocytosis and signaling

D Mukhopadhyay, H Riezman - Science, 2007 - science.org
Ubiquitination is a reversible posttranslational modification of cellular proteins, in which a 76–
amino acid polypeptide, ubiquitin, is primarily attached to the ϵ-amino group of lysines in …

Histone acetyltransferase complexes: one size doesn't fit all

KK Lee, JL Workman - Nature reviews Molecular cell biology, 2007 - nature.com
Over the past 10 years, the study of histone acetyltransferases (HATs) has advanced
significantly, and a number of HATs have been isolated from various organisms. It emerged …

[HTML][HTML] Mechanism and function of deubiquitinating enzymes

AY Amerik, M Hochstrasser - … et Biophysica Acta (BBA)-Molecular Cell …, 2004 - Elsevier
Attachment of ubiquitin to proteins is a crucial step in many cellular regulatory mechanisms
and contributes to numerous biological processes, including embryonic development, the …

The general transcription machinery and general cofactors

MC Thomas, CM Chiang - Critical reviews in biochemistry and …, 2006 - Taylor & Francis
In eukaryotes, the core promoter serves as a platform for the assembly of transcription
preinitiation complex (PIC) that includes TFIIA, TFIIB, TFIID, TFIIE, TFIIF, TFIIH, and RNA …

Structure of the transcription coactivator SAGA

H Wang, C Dienemann, A Stützer, H Urlaub… - Nature, 2020 - nature.com
Gene transcription by RNA polymerase II is regulated by activator proteins that recruit the
coactivator complexes SAGA (Spt–Ada–Gcn5–acetyltransferase), and transcription factor IID …

Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression

A Shilatifard - Annu. Rev. Biochem., 2006 - annualreviews.org
It is more evident now than ever that nucleosomes can transmit epigenetic information from
one cell generation to the next. It has been demonstrated during the past decade that the …