Organellar introns in fungi, algae, and plants

J Mukhopadhyay, G Hausner - Cells, 2021 - mdpi.com
Introns are ubiquitous in eukaryotic genomes and have long been considered as 'junk
RNA'but the huge energy expenditure in their transcription, removal, and degradation …

Functionalized graphene grids with various charges for single-particle cryo-EM

Y Lu, N Liu, Y Liu, L Zheng, J Yang, J Wang… - Nature …, 2022 - nature.com
A major hurdle for single particle cryo-EM in structural determination lies in the specimen
preparation impaired by the air-water interface (AWI) and preferential particle-orientation …

Structural insights into intron catalysis and dynamics during splicing

L Xu, T Liu, K Chung, AM Pyle - Nature, 2023 - nature.com
The group II intron ribonucleoprotein is an archetypal splicing system with numerous
mechanistic parallels to the spliceosome, including excision of lariat introns,. Despite the …

Structures of a mobile intron retroelement poised to attack its structured DNA target

K Chung, L Xu, P Chai, J Peng, SC Devarkar, AM Pyle - Science, 2022 - science.org
Group II introns are ribozymes that catalyze their self-excision and function as retroelements
that invade DNA. As retrotransposons, group II introns form ribonucleoprotein (RNP) …

Cryo-EM: A window into the dynamic world of RNA molecules

X Zhang, S Li, K Zhang - Current Opinion in Structural Biology, 2024 - Elsevier
RNAs are critical for complex cellular functions, characterized by their structural versatility
and ability to undergo conformational transitions in response to cellular cues. The elusive …

Structural basis of circularly permuted group II intron self-splicing

Z Su, L Wang, J Xie, C Zhang, J Zou, Z Huang, X Chen… - 2024 - researchsquare.com
The group II introns are self-splicing ribozymes intervened between two exons that undergo
excision and exon ligation through lariat formation, which are considered as ancestral forms …

Molecular characterization of both transesterification reactions of the group II intron circularization pathway

F LaRoche-Johnston, C Monat, E Verreault… - Nucleic Acids …, 2021 - academic.oup.com
Group II introns can self-splice from RNA transcripts through branching, hydrolysis and
circularization, being released as lariats, linear introns and circles, respectively. In contrast …

Structural Insights Into Group II Intron Splicing and Retrotransposition

K Chung - 2024 - search.proquest.com
Pre-mRNA processing is a critical metabolic step in eukaryotes. RNA transcripts must be
spliced, polyadenylated, and capped, among other modifications, to ensure their proper …

A Tale of Two Self-Splicing Pathways

E Ahunbay - 2024 - zora.uzh.ch
Group II intron ribozymes undergo dramatic structural rearrangements to self-splice and
retrohome. The group II intron branching pathway is of evolutionary importance as it is …

[PDF][PDF] A New EBS2b-IBS2b Base Paring (A28/T28) Improved the Gene-Targeting Efficiency of Thermotargetron in Escherichia coli

J Liao, Z Guan, P Luo, Z Chen, X Qi, W Hong - 2023 - researchgate.net
Thermophilic group II intron is one type of retrotransposon composed of intron RNA and
intron-encoded protein (IEP), which can be utilized in gene targeting by harnessing their …