Global signatures of protein and mRNA expression levels

R de Sousa Abreu, LO Penalva, EM Marcotte… - Molecular …, 2009 - pubs.rsc.org
Cellular states are determined by differential expression of the cell's proteins. The
relationship between protein and mRNA expression levels informs about the combined …

When place matters: shuttling of enolase-1 across cellular compartments

M Didiasova, L Schaefer, M Wygrecka - Frontiers in cell and …, 2019 - frontiersin.org
Enolase is a glycolytic enzyme, which catalyzes the inter-conversion of 2-phosphoglycerate
to phosphoenolpyruvate. Altered expression of this enzyme is frequently observed in cancer …

Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite

TL Campbell, EK De Silva, KL Olszewski… - PLoS …, 2010 - journals.plos.org
The molecular mechanisms underlying transcriptional regulation in apicomplexan parasites
remain poorly understood. Recently, the Apicomplexan AP2 (ApiAP2) family of DNA binding …

Strand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA

KM Broadbent, JC Broadbent, U Ribacke, D Wirth… - BMC genomics, 2015 - Springer
Background The human malaria parasite Plasmodium falciparum has a complex and multi-
stage life cycle that requires extensive and precise gene regulation to allow invasion and …

Global Analysis of Protein Expression and Phosphorylation of Three Stages of Plasmodium falciparum Intraerythrocytic Development

BN Pease, EL Huttlin, MP Jedrychowski… - Journal of proteome …, 2013 - ACS Publications
During asexual intraerythrocytic development, Plasmodium falciparum diverges from the
paradigm of the eukaryotic cell cycles by undergoing multiple rounds of DNA replication and …

Quantitative time-course profiling of parasite and host cell proteins in the human malaria parasite Plasmodium falciparum

BJ Foth, N Zhang, BK Chaal, SK Sze, PR Preiser… - Molecular & cellular …, 2011 - ASBMB
Studies of the Plasmodium falciparum transcriptome have shown that the tightly controlled
progression of the parasite through the intra-erythrocytic developmental cycle (IDC) is …

Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum

EM Bunnik, DWD Chung, M Hamilton, N Ponts, A Saraf… - Genome biology, 2013 - Springer
Background In eukaryotic organisms, gene expression is regulated at multiple levels during
the processes of transcription and translation. The absence of a tight regulatory network for …

Emerging biology of noncoding RNAs in malaria parasites

K Simantov, M Goyal, R Dzikowski - PLoS pathogens, 2022 - journals.plos.org
In eukaryotic organisms, noncoding RNAs (ncRNAs) have been implicated as important
regulators of multifaceted biological processes, including transcriptional, posttranscriptional …

The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum

EM Bunnik, G Batugedara, A Saraf, J Prudhomme… - Genome biology, 2016 - Springer
Background Gene expression is controlled at multiple levels, including transcription,
stability, translation, and degradation. Over the years, it has become apparent that …

Transcriptome-wide dynamics of extensive m6A mRNA methylation during Plasmodium falciparum blood-stage development

S Baumgarten, JM Bryant, A Sinha, T Reyser… - Nature …, 2019 - nature.com
Malaria pathogenesis results from the asexual replication of Plasmodium falciparum within
human red blood cells, which relies on a precisely timed cascade of gene expression over a …