Limb development: a paradigm of gene regulation

F Petit, KE Sears, N Ahituv - Nature Reviews Genetics, 2017 - nature.com
The limb is a commonly used model system for developmental biology. Given the need for
precise control of complex signalling pathways to achieve proper patterning, the limb is also …

A beginner's guide to low‐coverage whole genome sequencing for population genomics

RN Lou, A Jacobs, AP Wilder… - Molecular …, 2021 - Wiley Online Library
Low‐coverage whole genome sequencing (lcWGS) has emerged as a powerful and cost‐
effective approach for population genomic studies in both model and nonmodel species …

Genetic and molecular basis of feather diversity in birds

CS Ng, WH Li - Genome biology and evolution, 2018 - academic.oup.com
Feather diversity is striking in many aspects. Although the development of feather has been
studied for decades, genetic and genomic studies of feather diversity have begun only …

Contrasting genomic shifts underlie parallel phenotypic evolution in response to fishing

NO Therkildsen, AP Wilder, DO Conover, SB Munch… - Science, 2019 - science.org
Humans cause widespread evolutionary change in nature, but we still know little about the
genomic basis of rapid adaptation in the Anthropocene. We tracked genomic changes …

Dynamic 3D chromatin architecture contributes to enhancer specificity and limb morphogenesis

BK Kragesteen, M Spielmann, C Paliou, V Heinrich… - Nature …, 2018 - nature.com
The regulatory specificity of enhancers and their interaction with gene promoters is thought
to be controlled by their sequence and the binding of transcription factors. By studying Pitx1 …

Introgression of regulatory alleles and a missense coding mutation drive plumage pattern diversity in the rock pigeon

AI Vickrey, R Bruders, Z Kronenberg, E Mackey… - Elife, 2018 - elifesciences.org
Birds and other vertebrates display stunning variation in pigmentation patterning, yet the
genes controlling this diversity remain largely unknown. Rock pigeons (Columba livia) are …

An allelic series at the EDNRB2 locus controls diverse piebalding patterns in the domestic pigeon

ET Maclary, R Wauer, B Phillips, A Brown, EF Boer… - PLoS …, 2023 - journals.plos.org
Variation in pigment patterns within and among vertebrate species reflects underlying
changes in cell migration and function that can impact health, reproductive success, and …

Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features

R Seki, C Li, Q Fang, S Hayashi, S Egawa, J Hu… - Nature …, 2017 - nature.com
Unlike microevolutionary processes, little is known about the genetic basis of
macroevolutionary processes. One of these magnificent examples is the transition from non …

[HTML][HTML] Pennaraptoran theropod dinosaurs past progress and new frontiers

M Pittman, X Xu - Bulletin of the American Museum of Natural History, 2020 - BioOne
This chapter will cover clade definitions, the relationships within clades as well as the
occasional controversial relationships between different clades. Phylogenies arising from a …

A novel enhancer near the Pitx1 gene influences development and evolution of pelvic appendages in vertebrates

AC Thompson, TD Capellini, CA Guenther, YF Chan… - Elife, 2018 - elifesciences.org
Vertebrate pelvic reduction is a classic example of repeated evolution. Recurrent loss of
pelvic appendages in sticklebacks has previously been linked to natural mutations in a …