The Phenix software for automated determination of macromolecular structures

PD Adams, PV Afonine, G Bunkóczi, VB Chen… - Methods, 2011 - Elsevier
X-ray crystallography is a critical tool in the study of biological systems. It is able to provide
information that has been a prerequisite to understanding the fundamentals of life. It is also a …

X-ray solution scattering (SAXS) combined with crystallography and computation: defining accurate macromolecular structures, conformations and assemblies in …

CD Putnam, M Hammel, GL Hura… - Quarterly reviews of …, 2007 - cambridge.org
Crystallography supplies unparalleled detail on structural information critical for mechanistic
analyses; however, it is restricted to describing low energy conformations of …

Small-molecule inhibition of METTL3 as a strategy against myeloid leukaemia

E Yankova, W Blackaby, M Albertella, J Rak… - Nature, 2021 - nature.com
Abstract N 6-methyladenosine (m6A) is an abundant internal RNA modification, that is
catalysed predominantly by the METTL3–METTL14 methyltransferase complex,. The m6A …

Inhibition of METTL3 results in a cell-intrinsic interferon response that enhances antitumor immunity

AA Guirguis, Y Ofir-Rosenfeld, K Knezevic, W Blackaby… - Cancer Discovery, 2023 - AACR
Therapies that enhance antitumor immunity have altered the natural history of many
cancers. Consequently, leveraging nonoverlapping mechanisms to increase …

[PDF][PDF] CCP4i2: the new graphical user interface to the CCP4 program suite

L Potterton, J Agirre, C Ballard, K Cowtan… - … Section D: Structural …, 2018 - journals.iucr.org
The CCP4 (Collaborative Computational Project, Number 4) software suite for
macromolecular structure determination by X-ray crystallography groups brings together …

In vitro selection of macrocyclic peptide inhibitors containing cyclic γ2,4-amino acids targeting the SARS-CoV-2 main protease

T Miura, TR Malla, CD Owen, A Tumber, L Brewitz… - Nature Chemistry, 2023 - nature.com
Abstract γ-Amino acids can play important roles in the biological activities of natural
products; however, the ribosomal incorporation of γ-amino acids into peptides is …

Enantioselective, intermolecular benzylic C–H amination catalysed by an engineered iron-haem enzyme

CK Prier, RK Zhang, AR Buller, S Brinkmann-Chen… - Nature …, 2017 - nature.com
C–H bonds are ubiquitous structural units of organic molecules. Although these bonds are
generally considered to be chemically inert, the recent emergence of methods for C–H …

Alkyne derivatives of SARS-CoV-2 main protease inhibitors including nirmatrelvir inhibit by reacting covalently with the Nucleophilic Cysteine

L Brewitz, L Dumjahn, Y Zhao, CD Owen… - Journal of Medicinal …, 2023 - ACS Publications
Nirmatrelvir (PF-07321332) is a nitrile-bearing small-molecule inhibitor that, in combination
with ritonavir, is used to treat infections by severe acute respiratory syndrome coronavirus-2 …

Computational design of self-assembling protein nanomaterials with atomic level accuracy

NP King, W Sheffler, MR Sawaya, BS Vollmar… - Science, 2012 - science.org
We describe a general computational method for designing proteins that self-assemble to a
desired symmetric architecture. Protein building blocks are docked together symmetrically to …

[PDF][PDF] Overview of the CCP4 suite and current developments

MD Winn, CC Ballard, KD Cowtan… - … Section D: Biological …, 2011 - journals.iucr.org
The CCP4 (Collaborative Computational Project, Number 4) software suite is a collection of
programs and associated data and software libraries which can be used for macromolecular …