The avian gut microbiota: Diversity, influencing factors, and future directions

F Sun, J Chen, K Liu, M Tang, Y Yang - Frontiers in Microbiology, 2022 - frontiersin.org
The gut microbiota is viewed as the “second genome” of animals, sharing intricate
relationships with their respective hosts. Because the gut microbial community and its …

Conserve the germs: the gut microbiota and adaptive potential

HC Hauffe, C Barelli - Conservation Genetics, 2019 - Springer
Although the diversity of microbial communities (microbiota) inhabiting body niches are of
proven importance to health in both humans and non-human animals, the functional …

The microbiome in threatened species conservation

AG West, DW Waite, P Deines, DG Bourne… - Biological …, 2019 - Elsevier
As global biodiversity continues to reduce at an alarming rate, threatened species are
increasingly being brought under intensive management or into captivity. However, current …

Land-use change has host-specific influences on avian gut microbiomes

PA San Juan, JN Hendershot, GC Daily… - The ISME …, 2020 - academic.oup.com
Human modification of the environment, particularly through land-use change, often reduces
animal species diversity. However, the effect of land-use change on the gut microbiome of …

Gut microbiota of the threatened takahē: Biogeographic patterns and conservation implications

AG West, A DeLaunay, P Marsh, EK Perry, M Jolly… - Animal Microbiome, 2022 - Springer
Abstract Background The Aotearoa New Zealand takahē (Porphyrio hochstetteri), once
thought to be extinct, is a nationally threatened flightless rail under intensive conservation …

16S rRNA gene-based microbiota profiles from diverse avian faeces are largely independent of DNA preservation and extraction method

J Edwards, C Hoffbeck, AG West, A Pas… - Frontiers in …, 2023 - frontiersin.org
The avian gut microbiota has been the subject of considerable recent attention, with
potential implications for diverse fields such as the poultry industry, microbial ecology, and …

Bacterial communities along parrot digestive and respiratory tracts: the effects of sample type, species and time

L Schmiedová, K Černá, T Li, M Těšický… - International …, 2024 - Springer
Digestive and respiratory tracts are inhabited by rich bacterial communities that can vary
between their different segments. In comparison with other bird taxa with developed caeca …

Influence of management practice on the microbiota of a critically endangered species: a longitudinal study of kākāpō chick faeces and associated nest litter

AG West, A Digby, G Lear, Kākāpō Recovery Team… - Animal microbiome, 2022 - Springer
Background The critically endangered kākāpō is a flightless, nocturnal parrot endemic to
Aotearoa New Zealand. Recent efforts to describe the gastrointestinal microbial community …

Elusive aetiology of exudative cloacitis in the critically endangered kākāpō

AG West, NJ Ayriss, M Hoggard, A Digby… - New Zealand Journal …, 2024 - Taylor & Francis
The kākāpō (Strigops habroptilus) is a critically endangered, flightless parrot endemic to
Aotearoa New Zealand. While an intensive recovery programme has led to considerable …

The costs and benefits of a dynamic host microbiome

MAF Gillingham, H Prüter, BK Montero… - Trends in Ecology & …, 2024 - cell.com
All species host a rich community of microbes. This microbiome is dynamic, and displays
seasonal, daily, and even hourly changes, but also needs to be resilient to fulfill important …