Polymer translocation: the first two decades and the recent diversification
Probably no other field of statistical physics at the borderline of soft matter and biological
physics has caused such a flurry of papers as polymer translocation since the 1994 …
physics has caused such a flurry of papers as polymer translocation since the 1994 …
Single-polymer dynamics under constraints: scaling theory and computer experiment
A Milchev - Journal of Physics: Condensed Matter, 2011 - iopscience.iop.org
The relaxation, diffusion and translocation dynamics of single linear polymer chains in
confinement is briefly reviewed with emphasis on the comparison between theoretical …
confinement is briefly reviewed with emphasis on the comparison between theoretical …
[图书][B] Polymer translocation
M Muthukumar - 2016 - books.google.com
A reflection of the significant advances in the field, this book discusses the macromolecular
basis of polymer translocation that have emerged based on experimentation, new models …
basis of polymer translocation that have emerged based on experimentation, new models …
Sucking genes into pores: Insight into driven translocation
T Sakaue - Physical Review E—Statistical, Nonlinear, and Soft …, 2010 - APS
Flexible polymers such as long DNA, RNA molecules, and proteins, can pass through a
narrow pore whose size is comparable to their molecular thickness. We highlight the …
narrow pore whose size is comparable to their molecular thickness. We highlight the …
Unifying model of driven polymer translocation
T Ikonen, A Bhattacharya, T Ala-Nissila, W Sung - Physical Review E …, 2012 - APS
We present a Brownian dynamics model of driven polymer translocation, in which
nonequilibrium memory effects arising from tension propagation (TP) along the cis side …
nonequilibrium memory effects arising from tension propagation (TP) along the cis side …
Smooth DNA transport through a narrowed pore geometry
Voltage-driven transport of double-stranded DNA through nanoscale pores holds much
potential for applications in quantitative molecular biology and biotechnology, yet the …
potential for applications in quantitative molecular biology and biotechnology, yet the …
Driven polymer translocation through nanopores: Slow-vs.-fast dynamics
We investigate the dynamics of polymer translocation through nanopores under external
driving by 3D Langevin Dynamics simulations, focusing on the scaling of the average …
driving by 3D Langevin Dynamics simulations, focusing on the scaling of the average …
Force-driven polymer translocation through a nanopore: An old problem revisited
P Rowghanian, AY Grosberg - The Journal of Physical Chemistry …, 2011 - ACS Publications
We consider DNA translocation through a pore in a planar membrane. The pore is so narrow
that only one DNA segment can fit in. Assuming that the biasing force f acts inside the pore …
that only one DNA segment can fit in. Assuming that the biasing force f acts inside the pore …
Influence of non-universal effects on dynamical scaling in driven polymer translocation
T Ikonen, A Bhattacharya, T Ala-Nissila… - The Journal of chemical …, 2012 - pubs.aip.org
We study the dynamics of driven polymer translocation using both molecular dynamics (MD)
simulations and a theoretical model based on the non-equilibrium tension propagation on …
simulations and a theoretical model based on the non-equilibrium tension propagation on …
Iso-flux tension propagation theory of driven polymer translocation: The role of initial configurations
J Sarabadani, T Ikonen, T Ala-Nissila - The Journal of Chemical …, 2014 - pubs.aip.org
We investigate the dynamics of pore-driven polymer translocation by theoretical analysis
and molecular dynamics (MD) simulations. Using the tension propagation theory within the …
and molecular dynamics (MD) simulations. Using the tension propagation theory within the …