pasta: Pattern Analysis for Spatial Omics Data

M Emons, S Gunz, HL Crowell, I Mallona… - arXiv preprint arXiv …, 2024 - arxiv.org
Spatial omics assays allow for the molecular characterisation of cells in their spatial context.
Notably, the two main technological streams, imaging-based and high-throughput …

Integrating diverse statistical methods to analyse stage-discriminatory cell interactions in colorectal neoplasia

JA Bull, EJ Mulholland, JW Moore, JJ Bosque, BJ Stolz… - bioRxiv, 2024 - biorxiv.org
Spatial biology has the potential to unlock information about the disrupted cellular
ecosystems that define human disease. Quantitative analysis of spatially-resolved cell …

[PDF][PDF] Graph Neural Network-Driven Analysis of Cellular Organization for Non-Small Cell Lung Cancer Precision Oncology

L Rabuzin - 2024 - research-collection.ethz.ch
Non-small cell lung cancer (NSCLC) remains a leading cause of cancerrelated mortality,
underscoring the urgent need for advanced diagnostic and therapeutic strategies. This study …