Intracellular pH is a tightly controlled signal in yeast

R Orij, S Brul, GJ Smits - Biochimica et Biophysica Acta (BBA)-General …, 2011 - Elsevier
BACKGROUND: Nearly all processes in living cells are pH dependent, which is why
intracellular pH (pHi) is a tightly regulated physiological parameter in all cellular systems …

Lipid tales of viral replication and transmission

N Altan-Bonnet - Trends in cell biology, 2017 - cell.com
Positive-strand RNA viruses are the largest group of RNA viruses on Earth and cellular
membranes are critical for all aspects of their life cycle, from entry and replication to exit. In …

Phosphatidic acid is a pH biosensor that links membrane biogenesis to metabolism

BP Young, JJH Shin, R Orij, JT Chao, SC Li, XL Guan… - Science, 2010 - science.org
Recognition of lipids by proteins is important for their targeting and activation in many
signaling pathways, but the mechanisms that regulate such interactions are largely …

[HTML][HTML] Regulation of V-ATPase activity and organelle pH by phosphatidylinositol phosphate lipids

S Banerjee, PM Kane - Frontiers in Cell and Developmental Biology, 2020 - frontiersin.org
Luminal pH and the distinctive distribution of phosphatidylinositol phosphate (PIP) lipids are
central identifying features of organelles in all eukaryotic cells that are also critical for …

Considering protonation as a posttranslational modification regulating protein structure and function

A Schönichen, BA Webb, MP Jacobson… - Annual review of …, 2013 - annualreviews.org
Posttranslational modification is an evolutionarily conserved mechanism for regulating
protein activity, binding affinity, and stability. Compared with established posttranslational …

Regulation of actin assembly by PI (4, 5) P2 and other inositol phospholipids: an update on possible mechanisms

PA Janmey, R Bucki, R Radhakrishnan - Biochemical and biophysical …, 2018 - Elsevier
Actin cytoskeleton dynamics depend on a tight regulation of actin filament formation from an
intracellular pool of monomers, followed by their linkage to each other or to cell membranes …

[HTML][HTML] Membrane binding controls ordered self-assembly of animal septins

A Szuba, F Bano, G Castro-Linares, F Iv, M Mavrakis… - Elife, 2021 - elifesciences.org
Septins are conserved cytoskeletal proteins that regulate cell cortex mechanics. The
mechanisms of their interactions with the plasma membrane remain poorly understood …

[HTML][HTML] Putting the pH into phosphatidic acid signaling

JJH Shin, CJR Loewen - BMC biology, 2011 - Springer
The lipid phosphatidic acid (PA) has important roles in cell signaling and metabolic
regulation in all organisms. New evidence indicates that PA also has an unprecedented role …

Cellular and molecular interactions of phosphoinositides and peripheral proteins

RV Stahelin, JL Scott, CT Frick - Chemistry and physics of lipids, 2014 - Elsevier
Anionic lipids act as signals for the recruitment of proteins containing cationic clusters to
biological membranes. A family of anionic lipids known as the phosphoinositides (PIPs) are …

Improved parameterization of phosphatidylinositide lipid headgroups for the martini 3 coarse-grain force field

L Borges-Araújo, PCT Souza… - Journal of Chemical …, 2021 - ACS Publications
Phosphoinositides are a family of membrane phospholipids that play crucial roles in
membrane regulatory events. As such, these lipids are often a key part of molecular …