Cell-wall recycling of the gram-negative bacteria and the nexus to antibiotic resistance

DA Dik, JF Fisher, S Mobashery - Chemical reviews, 2018 - ACS Publications
The importance of the cell wall to the viability of the bacterium is underscored by the breadth
of antibiotic structures that act by blocking key enzymes that are tasked with cell-wall …

Transcription factor-based biosensors enlightened by the analyte

R Fernandez-López, R Ruiz, F de la Cruz… - Frontiers in …, 2015 - frontiersin.org
Whole cell biosensors (WCBs) have multiple applications for environmental monitoring,
detecting a wide range of pollutants. WCBs depend critically on the sensitivity and specificity …

Structural Basis for Native Agonist and Synthetic Inhibitor Recognition by the Pseudomonas aeruginosa Quorum Sensing Regulator PqsR (MvfR)

A Ilangovan, M Fletcher, G Rampioni, C Pustelny… - PLoS …, 2013 - journals.plos.org
Bacterial populations co-ordinate gene expression collectively through quorum sensing
(QS), a cell-to-cell communication mechanism employing diffusible signal molecules. The …

Coordinating carbon and nitrogen metabolic signaling through the cyanobacterial global repressor NdhR

YL Jiang, XP Wang, H Sun, SJ Han… - Proceedings of the …, 2018 - National Acad Sciences
The coordination of carbon and nitrogen metabolism is essential for bacteria to adapt to
nutritional variations in the environment, but the underlying mechanism remains poorly …

Versatility and complexity: common and uncommon facets of LysR-type transcriptional regulators

AC Baugh, C Momany, EL Neidle - Annual Review of …, 2023 - annualreviews.org
LysR-type transcriptional regulators (LTTRs) form one of the largest families of bacterial
regulators. They are widely distributed and contribute to all aspects of metabolism and …

Functional Mechanism of the Efflux Pumps Transcription Regulators From Pseudomonas aeruginosa Based on 3D Structures

K Housseini B Issa, G Phan, I Broutin - Frontiers in molecular …, 2018 - frontiersin.org
Bacterial antibiotic resistance is a worldwide health problem that deserves important
research attention in order to develop new therapeutic strategies. Recently, the World Health …

Structural dynamics in the evolution of a bilobed protein scaffold

G Gouridis, YA Muthahari, M de Boer… - Proceedings of the …, 2021 - National Acad Sciences
Novel biophysical tools allow the structural dynamics of proteins and the regulation of such
dynamics by binding partners to be explored in unprecedented detail. Although this has …

LysR-type transcriptional regulators: state of the art

S Mayo-Pérez, Y Gama-Martínez, S Dávila… - Critical Reviews in …, 2024 - Taylor & Francis
The LysR-type transcriptional regulators (LTTRs) are DNA-binding proteins present in
bacteria, archaea, and in algae. Knowledge about their distribution, abundance, evolution …

The β-lactamase gene regulator AmpR is a tetramer that recognizes and binds the D-Ala-D-Ala motif of its repressor UDP-N-acetylmuramic acid (MurNAc) …

G Vadlamani, MD Thomas, TR Patel, LJ Donald… - Journal of biological …, 2015 - ASBMB
Inducible expression of chromosomal AmpC β-lactamase is a major cause of β-lactam
antibiotic resistance in the Gram-negative bacteria Pseudomonas aeruginosa and …

[PDF][PDF] Verification: model-free phasing with enhanced predicted models in ARCIMBOLDO_SHREDDER

A Medina, E Jiménez, I Caballero… - … Section D: Structural …, 2022 - journals.iucr.org
Structure predictions have matched the accuracy of experimental structures from close
homologues, providing suitable models for molecular replacement phasing. Even in …