Single-molecule localization microscopy

M Lelek, MT Gyparaki, G Beliu, F Schueder… - Nature reviews …, 2021 - nature.com
Single-molecule localization microscopy (SMLM) describes a family of powerful imaging
techniques that dramatically improve spatial resolution over standard, diffraction-limited …

Spatial proteomics: a powerful discovery tool for cell biology

E Lundberg, GHH Borner - Nature Reviews Molecular Cell Biology, 2019 - nature.com
Protein subcellular localization is tightly controlled and intimately linked to protein function in
health and disease. Capturing the spatial proteome—that is, the localizations of proteins and …

OpenCell: Endogenous tagging for the cartography of human cellular organization

NH Cho, KC Cheveralls, AD Brunner, K Kim… - Science, 2022 - science.org
Elucidating the wiring diagram of the human cell is a central goal of the postgenomic era.
We combined genome engineering, confocal live-cell imaging, mass spectrometry, and data …

Atlas of subcellular RNA localization revealed by APEX-Seq

FM Fazal, S Han, KR Parker, P Kaewsapsak, J Xu… - Cell, 2019 - cell.com
We introduce APEX-seq, a method for RNA sequencing based on direct proximity labeling of
RNA using the peroxidase enzyme APEX2. APEX-seq in nine distinct subcellular locales …

Small-molecule fluorescent probes for live-cell super-resolution microscopy

L Wang, MS Frei, A Salim… - Journal of the American …, 2018 - ACS Publications
Super-resolution fluorescence microscopy is a powerful tool to visualize biomolecules and
cellular structures at the nanometer scale. Employing these techniques in living cells has …

Small-molecule fluorogenic probes for mitochondrial nanoscale imaging

R Zhai, B Fang, Y Lai, B Peng, H Bai, X Liu… - Chemical Society …, 2023 - pubs.rsc.org
Mitochondria are inextricably linked to the development of diseases and cell metabolism
disorders. Super-resolution imaging (SRI) is crucial in enhancing our understanding of …

Correlative three-dimensional super-resolution and block-face electron microscopy of whole vitreously frozen cells

DP Hoffman, G Shtengel, CS Xu, KR Campbell… - Science, 2020 - science.org
INTRODUCTION Our textbook understanding of the nanoscale organization of the cell and
its relationship to the thousands of proteins that drive cellular metabolism comes largely from …

Super-resolution structured illumination microscopy

R Heintzmann, T Huser - Chemical reviews, 2017 - ACS Publications
Super-resolved structured illumination microscopy (SR-SIM) is among the most rapidly
growing fluorescence microscopy techniques that can surpass the optical diffraction limit …

The how and why of lncRNA function: an innate immune perspective

EK Robinson, S Covarrubias, S Carpenter - Biochimica et Biophysica Acta …, 2020 - Elsevier
Next-generation sequencing has provided a more complete picture of the composition of the
human transcriptome indicating that much of the “blueprint” is a vastness of poorly …

Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution

R Gao, SM Asano, S Upadhyayula, I Pisarev, DE Milkie… - Science, 2019 - science.org
INTRODUCTION Neural circuits across the brain are composed of structures spanning
seven orders of magnitude in size that are assembled from thousands of distinct protein …