MiFish metabarcoding: a high-throughput approach for simultaneous detection of multiple fish species from environmental DNA and other samples
We reviewed the current methodology and practices of the DNA metabarcoding approach
using a universal PCR primer pair MiFish, which co-amplifies a short fragment of fish DNA …
using a universal PCR primer pair MiFish, which co-amplifies a short fragment of fish DNA …
Fishing for fish environmental DNA: Ecological applications, methodological considerations, surveying designs, and ways forward
Vast global declines of freshwater and marine fish diversity and population abundance pose
serious threats to both ecosystem sustainability and human livelihoods. Environmental DNA …
serious threats to both ecosystem sustainability and human livelihoods. Environmental DNA …
[图书][B] Environmental DNA: For biodiversity research and monitoring
Environmental DNA (eDNA) refers to DNA that can be extracted from environmental
samples (such as soil, water, feces, or air) without the prior isolation of any target organism …
samples (such as soil, water, feces, or air) without the prior isolation of any target organism …
Next‐generation monitoring of aquatic biodiversity using environmental DNA metabarcoding
Global biodiversity in freshwater and the oceans is declining at high rates. Reliable tools for
assessing and monitoring aquatic biodiversity, especially for rare and secretive species, are …
assessing and monitoring aquatic biodiversity, especially for rare and secretive species, are …
Metacoder: An R package for visualization and manipulation of community taxonomic diversity data
ZSL Foster, TJ Sharpton… - PLoS computational …, 2017 - journals.plos.org
Community-level data, the type generated by an increasing number of metabarcoding
studies, is often graphed as stacked bar charts or pie graphs that use color to represent taxa …
studies, is often graphed as stacked bar charts or pie graphs that use color to represent taxa …
Non‐specific amplification compromises environmental DNA metabarcoding with COI
Metabarcoding extra‐organismal DNA from environmental samples is now a key technique
in aquatic biomonitoring and ecosystem health assessment. Of critical consideration when …
in aquatic biomonitoring and ecosystem health assessment. Of critical consideration when …
obitools: a unix‐inspired software package for DNA metabarcoding
DNA metabarcoding offers new perspectives in biodiversity research. This recently
developed approach to ecosystem study relies heavily on the use of next‐generation …
developed approach to ecosystem study relies heavily on the use of next‐generation …
The detection of aquatic macroorganisms using environmental DNA analysis—A review of methods for collection, extraction, and detection
S Tsuji, T Takahara, H Doi, N Shibata… - Environmental …, 2019 - Wiley Online Library
The field of environmental DNA (eDNA) analysis has rapidly developed over the past
decade and the technique has become widely used for detecting aquatic macroorganisms in …
decade and the technique has become widely used for detecting aquatic macroorganisms in …
The detection of aquatic animal species using environmental DNA–a review of eDNA as a survey tool in ecology
HC Rees, BC Maddison, DJ Middleditch… - Journal of applied …, 2014 - Wiley Online Library
Knowledge of species distribution is critical to ecological management and conservation
biology. Effective management requires the detection of populations, which can sometimes …
biology. Effective management requires the detection of populations, which can sometimes …
Environmental DNA illuminates the dark diversity of sharks
In the era of “Anthropocene defaunation,” large species are often no longer detected in
habitats where they formerly occurred. However, it is unclear whether this apparent missing …
habitats where they formerly occurred. However, it is unclear whether this apparent missing …