A survey on deep learning in medical image reconstruction

E Ahishakiye, M Bastiaan Van Gijzen… - Intelligent …, 2021 - mednexus.org
Medical image reconstruction aims to acquire high-quality medical images for clinical usage
at minimal cost and risk to the patients. Deep learning and its applications in medical …

Deep learning‐based image reconstruction for different medical imaging modalities

M Yaqub, F Jinchao, K Arshid, S Ahmed… - … Methods in Medicine, 2022 - Wiley Online Library
Image reconstruction in magnetic resonance imaging (MRI) and computed tomography (CT)
is a mathematical process that generates images at many different angles around the …

Isotropic reconstruction for electron tomography with deep learning

YT Liu, H Zhang, H Wang, CL Tao, GQ Bi… - Nature …, 2022 - nature.com
Cryogenic electron tomography (cryoET) allows visualization of cellular structures in situ.
However, anisotropic resolution arising from the intrinsic “missing-wedge” problem has …

Structure, folding and flexibility of co-transcriptional RNA origami

EKS McRae, HØ Rasmussen, J Liu, A Bøggild… - Nature …, 2023 - nature.com
RNA origami is a method for designing RNA nanostructures that can self-assemble through
co-transcriptional folding with applications in nanomedicine and synthetic biology. However …

Direct in situ measurements of electrical properties of solid–electrolyte interphase on lithium metal anodes

Y Xu, H Jia, P Gao, DE Galvez-Aranda, SP Beltran… - Nature energy, 2023 - nature.com
The solid–electrolyte interphase (SEI) critically governs the performance of rechargeable
batteries. An ideal SEI is expected to be electrically insulative to prevent persistently …

HEMNMA-3D: cryo electron tomography method based on normal mode analysis to study continuous conformational variability of macromolecular complexes

M Harastani, M Eltsov, A Leforestier… - Frontiers in molecular …, 2021 - frontiersin.org
Cryogenic electron tomography (cryo-ET) allows structural determination of biomolecules in
their native environment (in situ). Its potential of providing information on the dynamics of …

Structure-based mechanism and inhibition of cholesteryl ester transfer protein

H Xue, M Zhang, J Liu, J Wang, G Ren - Current Atherosclerosis Reports, 2023 - Springer
Abstract Purpose of Review Cholesteryl ester transfer proteins (CETP) regulate plasma
cholesterol levels by transferring cholesteryl esters (CEs) among lipoproteins. Lipoprotein …

Isotropic reconstruction of electron tomograms with deep learning

YT Liu, H Zhang, H Wang, CL Tao, GQ Bi, ZH Zhou - Biorxiv, 2021 - biorxiv.org
Cryogenic electron tomography (cryoET) allows visualization of cellular structures in situ.
However, anisotropic resolution arising from the intrinsic “missing-wedge” problem has …

Designed and biologically active protein lattices

ST Wang, B Minevich, J Liu, H Zhang… - Nature …, 2021 - nature.com
Versatile methods to organize proteins in space are required to enable complex
biomaterials, engineered biomolecular scaffolds, cell-free biology, and hybrid nanoscale …

Molecular organization of the early stages of nucleosome phase separation visualized by cryo-electron tomography

M Zhang, C Díaz-Celis, B Onoa, C Cañari-Chumpitaz… - Molecular cell, 2022 - cell.com
It has been proposed that the intrinsic property of nucleosome arrays to undergo liquid-liquid
phase separation (LLPS) in vitro is responsible for chromatin domain organization in vivo …