Return of the Lemnaceae: duckweed as a model plant system in the genomics and postgenomics era

K Acosta, KJ Appenroth, L Borisjuk, M Edelman… - The Plant …, 2021 - academic.oup.com
The aquatic Lemnaceae family, commonly called duckweed, comprises some of the smallest
and fastest growing angiosperms known on Earth. Their tiny size, rapid growth by clonal …

Sequencing pools of individuals—mining genome-wide polymorphism data without big funding

C Schlötterer, R Tobler, R Kofler, V Nolte - Nature Reviews Genetics, 2014 - nature.com
The analysis of polymorphism data is becoming increasingly important as a complementary
tool to classical genetic analyses. Nevertheless, despite plunging sequencing costs …

Evolutionary genomics can improve prediction of species' responses to climate change

AM Waldvogel, B Feldmeyer, G Rolshausen… - Evolution …, 2020 - academic.oup.com
Global climate change (GCC) increasingly threatens biodiversity through the loss of species,
and the transformation of entire ecosystems. Many species are challenged by the pace of …

Genomics for monitoring and understanding species responses to global climate change

L Bernatchez, AL Ferchaud, CS Berger… - Nature Reviews …, 2024 - nature.com
All life forms across the globe are experiencing drastic changes in environmental conditions
as a result of global climate change. These environmental changes are happening rapidly …

Elucidating the molecular architecture of adaptation via evolve and resequence experiments

A Long, G Liti, A Luptak, O Tenaillon - Nature Reviews Genetics, 2015 - nature.com
Evolve and resequence (E&R) experiments use experimental evolution to adapt populations
to a novel environment, then next-generation sequencing to analyse genetic changes. They …

Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation

C Schlötterer, R Kofler, E Versace, R Tobler… - Heredity, 2015 - nature.com
Evolve and resequence (E&R) is a new approach to investigate the genomic responses to
selection during experimental evolution. By using whole genome sequencing of pools of …

When spring ephemerals fail to meet pollinators: mechanism of phenological mismatch and its impact on plant reproduction

G Kudo, EJ Cooper - Proceedings of the Royal Society B, 2019 - royalsocietypublishing.org
The flowering phenology of early-blooming plants is largely determined by snowmelt timing
in high-latitude and high-altitude ecosystems. When the synchrony of flowering and …

Molecular population genetics

S Casillas, A Barbadilla - Genetics, 2017 - academic.oup.com
Molecular population genetics aims to explain genetic variation and molecular evolution
from population genetics principles. The field was born 50 years ago with the first measures …

Standing Genetic Variation Drives Repeatable Experimental Evolution in Outcrossing Populations of Saccharomyces cerevisiae

MK Burke, G Liti, AD Long - Molecular biology and evolution, 2014 - academic.oup.com
Abstract In “evolve-and-resequence”(E&R) experiments, whole-genome sequence data from
laboratory-evolved populations can potentially uncover mechanisms of adaptive change …

Genome-wide signatures of synergistic epistasis during parallel adaptation in a Baltic Sea copepod

DB Stern, NW Anderson, JA Diaz, CE Lee - Nature Communications, 2022 - nature.com
The role of epistasis in driving adaptation has remained an unresolved problem dating back
to the Evolutionary Synthesis. In particular, whether epistatic interactions among genes …