Hydroxyl radical protein footprinting: a mass spectrometry-based structural method for studying the higher order structure of proteins
A McKenzie-Coe, NS Montes, LM Jones - Chemical reviews, 2021 - ACS Publications
Hydroxyl radical protein footprinting (HRPF) coupled to mass spectrometry has been
successfully used to investigate a plethora of protein-related questions. The method, which …
successfully used to investigate a plethora of protein-related questions. The method, which …
Hydroxyl radical-mediated modification of proteins as probes for structural proteomics
G Xu, MR Chance - Chemical reviews, 2007 - ACS Publications
“Footprinting” refers to assays that examine ligand binding and conformational changes by
determining the solvent accessibility of the backbone, bases, or side chain structures of …
determining the solvent accessibility of the backbone, bases, or side chain structures of …
Activation of tumor suppressor protein PP2A inhibits KRAS-driven tumor growth
Targeted cancer therapies, which act on specific cancer-associated molecular targets, are
predominantly inhibitors of oncogenic kinases. While these drugs have achieved some …
predominantly inhibitors of oncogenic kinases. While these drugs have achieved some …
Integration of mass spectrometry data for structural biology
Mass spectrometry (MS) is increasingly being used to probe the structure and dynamics of
proteins and the complexes they form with other macromolecules. There are now several …
proteins and the complexes they form with other macromolecules. There are now several …
Laser flash photolysis of hydrogen peroxide to oxidize protein solvent-accessible residues on the microsecond timescale
DM Hambly, ML Gross - Journal of the American Society for Mass …, 2005 - ACS Publications
Footprinting of proteins by hydroxyl radicals generated on the millisecond to minute
timescales to probe protein surfaces suffers from the uncertainty that radical reactions cause …
timescales to probe protein surfaces suffers from the uncertainty that radical reactions cause …
Mass spectrometry for structural characterization of therapeutic antibodies
Z Zhang, H Pan, X Chen - Mass spectrometry reviews, 2009 - Wiley Online Library
Antibodies, also known as immunoglobulins, have emerged as one of the most promising
classes of therapeutics in the biopharmaceutical industry. The need for complete …
classes of therapeutics in the biopharmaceutical industry. The need for complete …
Radiolytic protein footprinting with mass spectrometry to probe the structure of macromolecular complexes
K Takamoto, MR Chance - Annu. Rev. Biophys. Biomol. Struct., 2006 - annualreviews.org
Structural proteomics approaches using mass spectrometry are increasingly used in biology
to examine the composition and structure of macromolecules. Hydroxyl radical–mediated …
to examine the composition and structure of macromolecules. Hydroxyl radical–mediated …
Fast photochemical oxidation of protein footprints faster than protein unfolding
Fast photochemical oxidation of proteins (FPOP) is a chemical footprinting method whereby
exposed amino-acid residues are covalently labeled by oxidation with hydroxyl radicals …
exposed amino-acid residues are covalently labeled by oxidation with hydroxyl radicals …
Covalent labeling-mass spectrometry with non-specific reagents for studying protein structure and interactions
Using mass spectrometry (MS) to obtain information about a higher order structure of protein
requires that a protein's structural properties are encoded into the mass of that protein …
requires that a protein's structural properties are encoded into the mass of that protein …
Analysis of protein solvent accessible surfaces by photochemical oxidation and mass spectrometry
JS Sharp, JM Becker, RL Hettich - Analytical chemistry, 2004 - ACS Publications
Protein surfaces are important in most biological processes, including protein− protein
interactions, enzymatic catalysis, and protein− ligand binding. We report a method in which …
interactions, enzymatic catalysis, and protein− ligand binding. We report a method in which …