The effects of non-synonymous single nucleotide polymorphisms (nsSNPs) on protein–protein interactions
CM Yates, MJE Sternberg - Journal of molecular biology, 2013 - Elsevier
Non-synonymous single nucleotide polymorphisms (nsSNPs) are single base changes
leading to a change to the amino acid sequence of the encoded protein. Many of these …
leading to a change to the amino acid sequence of the encoded protein. Many of these …
In silico Approaches for the Design and Optimization of Interfering Peptides Against Protein–Protein Interactions
Large contact surfaces of protein–protein interactions (PPIs) remain to be an ongoing issue
in the discovery and design of small molecule modulators. Peptides are intrinsically capable …
in the discovery and design of small molecule modulators. Peptides are intrinsically capable …
Molecular evolution of cytochrome c oxidase underlies high-altitude adaptation in the bar-headed goose
Bar-headed geese (Anser indicus) fly at up to 9,000 m elevation during their migration over
the Himalayas, sustaining high metabolic rates in the severe hypoxia at these altitudes. We …
the Himalayas, sustaining high metabolic rates in the severe hypoxia at these altitudes. We …
Plasticity and redundancy among AMA–RON pairs ensure host cell entry of Toxoplasma parasites
MH Lamarque, M Roques, M Kong-Hap… - Nature …, 2014 - nature.com
Malaria and toxoplasmosis are infectious diseases caused by the apicomplexan parasites
Plasmodium and Toxoplasma gondii, respectively. These parasites have developed an …
Plasmodium and Toxoplasma gondii, respectively. These parasites have developed an …
Immunization with a functional protein complex required for erythrocyte invasion protects against lethal malaria
P Srinivasan, E Ekanem, A Diouf… - Proceedings of the …, 2014 - National Acad Sciences
An essential step in the invasion of red blood cells (RBCs) by Plasmodium falciparum (Pf)
merozoites is the binding of rhoptry neck protein 2 (RON2) to the hydrophobic groove of …
merozoites is the binding of rhoptry neck protein 2 (RON2) to the hydrophobic groove of …
Refining the structural model of a heterohexameric protein complex: Surface induced dissociation and ion mobility provide key connectivity and topology information
Toyocamycin nitrile hydratase (TNH) is a protein hexamer that catalyzes the hydration of
toyocamycin to produce sangivamycin. The structure of hexameric TNH and the …
toyocamycin to produce sangivamycin. The structure of hexameric TNH and the …
Evolution of ancient functions in the vertebrate insulin-like growth factor system uncovered by study of duplicated salmonid fish genomes
DJ Macqueen, D Garcia de la serrana… - … Biology and Evolution, 2013 - academic.oup.com
Whole-genome duplication (WGD) was experienced twice by the vertebrate ancestor (2
rounds; 2R), again by the teleost fish ancestor (3R) and most recently in certain teleost …
rounds; 2R), again by the teleost fish ancestor (3R) and most recently in certain teleost …
Comparative analysis of virus–host interactomes with a mammalian high-throughput protein complementation assay based on Gaussia princeps luciferase
G Neveu, P Cassonnet, PO Vidalain, C Rolloy… - Methods, 2012 - Elsevier
Comparative interactomics is a strategy for inferring potential interactions among
orthologous proteins or “interologs”. Herein we focus, in contrast to standard homology …
orthologous proteins or “interologs”. Herein we focus, in contrast to standard homology …
Exploring polypharmacology in drug discovery and repurposing using the CANDO platform
G Chopra, R Samudrala - Current pharmaceutical design, 2016 - ingentaconnect.com
Background: Traditional drug discovery approaches focus on a limited set of target
molecules for treatment against specific indications/diseases. However, drug absorption …
molecules for treatment against specific indications/diseases. However, drug absorption …
Structural bioinformatics of the interactome
D Petrey, B Honig - Annual review of biophysics, 2014 - annualreviews.org
The past decade has seen a dramatic expansion in the number and range of techniques
available to obtain genome-wide information and to analyze this information so as to infer …
available to obtain genome-wide information and to analyze this information so as to infer …