Polyproline-II helix in proteins: structure and function
AA Adzhubei, MJE Sternberg, AA Makarov - Journal of molecular biology, 2013 - Elsevier
The poly-l-proline type II (PPII) helix in recent years has emerged clearly as a structural class
not only of fibrillar proteins (in collagen, PPII is a dominant conformation) but also of the …
not only of fibrillar proteins (in collagen, PPII is a dominant conformation) but also of the …
Structural analysis of intrinsically disordered proteins by small-angle X-ray scattering
P Bernado, DI Svergun - Molecular biosystems, 2012 - pubs.rsc.org
Small-angle scattering of X-rays (SAXS) is an established method to study the overall
structure and structural transitions of biological macromolecules in solution. For folded …
structure and structural transitions of biological macromolecules in solution. For folded …
Structure and energetics of the hydrogen-bonded backbone in protein folding
DW Bolen, GD Rose - Annu. Rev. Biochem., 2008 - annualreviews.org
We seek to understand the link between protein thermodynamics and protein structure in
molecular detail. A classical approach to this problem involves assessing changes in protein …
molecular detail. A classical approach to this problem involves assessing changes in protein …
Atomic-level characterization of disordered protein ensembles
T Mittag, JD Forman-Kay - Current opinion in structural biology, 2007 - Elsevier
The roles of unfolded states of proteins in normal folding and in diseases involving
aggregation, as well as the prevalence and regulatory functions of intrinsically disordered …
aggregation, as well as the prevalence and regulatory functions of intrinsically disordered …
[HTML][HTML] Proline and glycine control protein self-organization into elastomeric or amyloid fibrils
Elastin provides extensible tissues, including arteries and skin, with the propensity for elastic
recoil, whereas amyloid fibrils are associated with tissue-degenerative diseases, such as …
recoil, whereas amyloid fibrils are associated with tissue-degenerative diseases, such as …
Structure and dynamics of the homologous series of alanine peptides: a joint molecular dynamics/NMR study
The ϕ, ψ backbone angle distribution of small homopolymeric model peptides is
investigated by a joint molecular dynamics (MD) simulation and heteronuclear NMR study …
investigated by a joint molecular dynamics (MD) simulation and heteronuclear NMR study …
Small-angle X-ray scattering from RNA, proteins, and protein complexes
Small-angle X-ray scattering (SAXS) is increasingly used to characterize the structure and
interactions of biological macromolecules and their complexes in solution. Although still a …
interactions of biological macromolecules and their complexes in solution. Although still a …
[HTML][HTML] Predictive atomic resolution descriptions of intrinsically disordered hTau40 and α-synuclein in solution from NMR and small angle scattering
The development of molecular descriptions of intrinsically disordered proteins (IDPs) is
essential for elucidating conformational transitions that characterize common …
essential for elucidating conformational transitions that characterize common …
[HTML][HTML] Evaluating the performance of the ff99SB force field based on NMR scalar coupling data
Force-field validation is essential for the identification of weaknesses in current models and
the development of more accurate models of biomolecules. NMR coupling and relaxation …
the development of more accurate models of biomolecules. NMR coupling and relaxation …
Conformation of the backbone in unfolded proteins
Despite its theoretical and practical importance, protein folding remains among the most
fundamental unsolved problems in the life sciences. The challenge of predicting folded …
fundamental unsolved problems in the life sciences. The challenge of predicting folded …