Nanopores in graphene and other 2D materials: a decade's journey toward sequencing

H Qiu, W Zhou, W Guo - ACS nano, 2021 - ACS Publications
Nanopore techniques offer a low-cost, label-free, and high-throughput platform that could be
used in single-molecule biosensing and in particular DNA sequencing. Since 2010 …

Transverse Detection of DNA Using a MoS2 Nanopore

M Graf, M Lihter, D Altus, S Marion, A Radenovic - Nano letters, 2019 - ACS Publications
Classical nanopore sensing relies on the measurement of the ion current passing through a
nanopore. Whenever a molecule electrophoretically translocates through the narrow …

[HTML][HTML] DNA punch cards for storing data on native DNA sequences via enzymatic nicking

SK Tabatabaei, B Wang, NBM Athreya… - Nature …, 2020 - nature.com
Synthetic DNA-based data storage systems have received significant attention due to the
promise of ultrahigh storage density and long-term stability. However, all known platforms …

Multifield-resolved phonon spectrometrics: structured crystals and liquids

X Yang, C Peng, L Li, M Bo, Y Sun, Y Huang… - Progress in Solid State …, 2019 - Elsevier
Bond relaxation from one equilibrium to another under perturbation matters uniquely the
performance of a substance and thus it has enormous impact to materials science and …

[HTML][HTML] Detecting topological variations of DNA at single-molecule level

K Liu, C Pan, A Kuhn, AP Nievergelt, GE Fantner… - Nature …, 2019 - nature.com
In addition to their use in DNA sequencing, ultrathin nanopore membranes have potential
applications in detecting topological variations in deoxyribonucleic acid (DNA). This is due …

[HTML][HTML] Detection and mapping of DNA methylation with 2D material nanopores

H Qiu, A Sarathy, K Schulten, JP Leburton - npj 2D Materials and …, 2017 - nature.com
DNA methylation is an epigenetic modification involving the addition of a methyl group to
DNA, which is heavily involved in gene expression and regulation, thereby critical to the …

Solid-State MoS2 Nanopore Membranes for Discriminating among the Lengths of RNA Tails on a Double-Stranded DNA: A New Simulation-Based Differentiating …

R Chakraborty, M Xiong, N Athreya… - ACS Applied Nano …, 2023 - ACS Publications
A robust and reliable detection scheme of RNA tails grown on a double-stranded DNA
(dsDNA) can pave the way to a denser encoding of DNA-based storage systems that use the …

Nanopore-Based Sensors for DNA Sequencing: A Review

J Wei, H Hong, X Wang, X Lei, M Ye, Z Liu - Nanoscale, 2024 - pubs.rsc.org
Nanopore sensors, owing to their distinctive structural properties, can be used to detect
biomolecular translocation events. These sensors operate by monitoring variations in …

Dna punch cards: Encoding data on native dna sequences via topological modifications

SK Tabatabaei, B Wang, NB Murali Athreya, B Enghiad… - BioRxiv, 2019 - biorxiv.org
Synthetic DNA-based data storage systems (–) have received significant attention due to the
promise of ultrahigh storage density. However, all proposed systems suffer from high cost …

[HTML][HTML] Interaction dynamics and site-specific electronic recognition of DNA-nicks with 2D solid-state nanopores

N Athreya, O Milenkovic, JP Leburton - npj 2D Materials and …, 2020 - nature.com
Single-stranded breaks in the DNA backbone caused by many endogenous and exogenous
agents often lead to double-stranded breaks that are known causes of chromosomal …