Pick one, but be quick: 5′ splice sites and the problems of too many choices
X Roca, AR Krainer, IC Eperon - Genes & development, 2013 - genesdev.cshlp.org
Splice site selection is fundamental to pre-mRNA splicing and the expansion of genomic
coding potential. 5′ Splice sites (5′ ss) are the critical elements at the 5′ end of introns …
coding potential. 5′ Splice sites (5′ ss) are the critical elements at the 5′ end of introns …
Post-translational control of RNA-binding proteins and disease-related dysregulation
A Velázquez-Cruz, B Baños-Jaime… - Frontiers in molecular …, 2021 - frontiersin.org
Cell signaling mechanisms modulate gene expression in response to internal and external
stimuli. Cellular adaptation requires a precise and coordinated regulation of the transcription …
stimuli. Cellular adaptation requires a precise and coordinated regulation of the transcription …
GraphProt: modeling binding preferences of RNA-binding proteins
We present GraphProt, a computational framework for learning sequence-and structure-
binding preferences of RNA-binding proteins (RBPs) from high-throughput experimental …
binding preferences of RNA-binding proteins (RBPs) from high-throughput experimental …
Linking hnRNP function to ALS and FTD pathology
Following years of rapid progress identifying the genetic underpinnings of amyotrophic
lateral sclerosis (ALS) and related diseases such as frontotemporal dementia (FTD) …
lateral sclerosis (ALS) and related diseases such as frontotemporal dementia (FTD) …
CryoEM structure of Saccharomyces cerevisiae U1 snRNP offers insight into alternative splicing
U1 snRNP plays a critical role in 5ʹ-splice site recognition and is a frequent target of
alternative splicing factors. These factors transiently associate with human U1 snRNP and …
alternative splicing factors. These factors transiently associate with human U1 snRNP and …
Tandem RNA binding sites induce self-association of the stress granule marker protein TIA-1
FE Loughlin, DL West, MJ Gunzburg… - Nucleic acids …, 2021 - academic.oup.com
TIA-1 is an RNA-binding protein that sequesters target RNA into stress granules under
conditions of cellular stress. Promotion of stress granule formation by TIA-1 depends upon …
conditions of cellular stress. Promotion of stress granule formation by TIA-1 depends upon …
KSHV inhibits stress granule formation by viral ORF57 blocking PKR activation
NR Sharma, V Majerciak, MJ Kruhlak… - PLoS …, 2017 - journals.plos.org
TIA-1 positive stress granules (SG) represent the storage sites of stalled mRNAs and are
often associated with the cellular antiviral response. In this report, we provide evidence that …
often associated with the cellular antiviral response. In this report, we provide evidence that …
Welander Distal Myopathy Caused by an Ancient Founder Mutation in TIA1 Associated with Perturbed Splicing
ABSTRACT W elander distal myopathy (WDM) is an adult onset autosomal dominant
disorder characterized by distal limb weakness, which progresses slowly from the fifth …
disorder characterized by distal limb weakness, which progresses slowly from the fifth …
[HTML][HTML] RNA recognition and stress granule formation by TIA proteins
Stress granule (SG) formation is a primary mechanism through which gene expression is
rapidly modulated when the eukaryotic cell undergoes cellular stresses (including heat …
rapidly modulated when the eukaryotic cell undergoes cellular stresses (including heat …
A structure-free method for quantifying conformational flexibility in proteins
All proteins sample a range of conformations at physiologic temperatures and this inherent
flexibility enables them to carry out their prescribed functions. A comprehensive …
flexibility enables them to carry out their prescribed functions. A comprehensive …