The shaky foundations of large language models and foundation models for electronic health records

M Wornow, Y Xu, R Thapa, B Patel, E Steinberg… - npj Digital …, 2023 - nature.com
The success of foundation models such as ChatGPT and AlphaFold has spurred significant
interest in building similar models for electronic medical records (EMRs) to improve patient …

Pre-training in medical data: A survey

Y Qiu, F Lin, W Chen, M Xu - Machine Intelligence Research, 2023 - Springer
Medical data refers to health-related information associated with regular patient care or as
part of a clinical trial program. There are many categories of such data, such as clinical …

Ehrshot: An ehr benchmark for few-shot evaluation of foundation models

M Wornow, R Thapa, E Steinberg… - Advances in Neural …, 2023 - proceedings.neurips.cc
While the general machine learning (ML) community has benefited from public datasets,
tasks, and models, the progress of ML in healthcare has been hampered by a lack of such …

Multimodal clinical benchmark for emergency care (mc-bec): A comprehensive benchmark for evaluating foundation models in emergency medicine

E Chen, A Kansal, J Chen, BT Jin… - Advances in …, 2024 - proceedings.neurips.cc
Abstract We propose the Multimodal Clinical Benchmark for Emergency Care (MC-BEC), a
comprehensive benchmark for evaluating foundation models in Emergency Medicine using …

Genhpf: General healthcare predictive framework for multi-task multi-source learning

K Hur, J Oh, J Kim, J Kim, MJ Lee, E Cho… - IEEE Journal of …, 2023 - ieeexplore.ieee.org
Despite the remarkable progress in the development of predictive models for healthcare,
applying these algorithms on a large scale has been challenging. Algorithms trained on a …

A multi-center study on the adaptability of a shared foundation model for electronic health records

LL Guo, J Fries, E Steinberg, SL Fleming, K Morse… - npj Digital …, 2024 - nature.com
Foundation models are transforming artificial intelligence (AI) in healthcare by providing
modular components adaptable for various downstream tasks, making AI development more …

Unihpf: Universal healthcare predictive framework with zero domain knowledge

K Hur, J Oh, J Kim, J Kim, MJ Lee, E Cho… - arXiv preprint arXiv …, 2022 - arxiv.org
Despite the abundance of Electronic Healthcare Records (EHR), its heterogeneity restricts
the utilization of medical data in building predictive models. To address this challenge, we …

Comparing neural language models for medical concept representation and patient trajectory prediction

A Bornet, D Proios, A Yazdani, F Jaume-Santero… - medRxiv, 2023 - medrxiv.org
Effective representation of medical concepts is crucial for secondary analyses of electronic
health records. Neural language models have shown promise in automatically deriving …

sEHR-CE: Language modelling of structured EHR data for efficient and generalizable patient cohort expansion

A Munoz-Farre, H Rose, SA Cakiroglu - arXiv preprint arXiv:2211.17121, 2022 - arxiv.org
Electronic health records (EHR) offer unprecedented opportunities for in-depth clinical
phenotyping and prediction of clinical outcomes. Combining multiple data sources is crucial …

Universal EHR federated learning framework

J Kim, K Hur, S Yang, E Choi - arXiv preprint arXiv:2211.07300, 2022 - arxiv.org
Federated learning (FL) is the most practical multi-source learning method for electronic
healthcare records (EHR). Despite its guarantee of privacy protection, the wide application …