Finding the genomic basis of local adaptation: pitfalls, practical solutions, and future directions

S Hoban, JL Kelley, KE Lotterhos… - The American …, 2016 - journals.uchicago.edu
Uncovering the genetic and evolutionary basis of local adaptation is a major focus of
evolutionary biology. The recent development of cost-effective methods for obtaining high …

The advantages and limitations of trait analysis with GWAS: a review

A Korte, A Farlow - Plant methods, 2013 - Springer
Over the last 10 years, high-density SNP arrays and DNA re-sequencing have illuminated
the majority of the genotypic space for a number of organisms, including humans, maize …

Nitrate transport, sensing, and responses in plants

JA O'Brien, A Vega, E Bouguyon, G Krouk, A Gojon… - Molecular plant, 2016 - cell.com
Nitrogen (N) is an essential macronutrient that affects plant growth and development. N is an
important component of chlorophyll, amino acids, nucleic acids, and secondary metabolites …

Genome-wide association studies in plant pathosystems: success or failure?

C Demirjian, F Vailleau, R Berthomé, F Roux - Trends in plant science, 2023 - cell.com
Harnessing natural genetic variation is an established alternative to artificial genetic
variation for investigating the molecular dialog between partners in plant pathosystems …

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

K Zhao, CW Tung, GC Eizenga, MH Wright… - Nature …, 2011 - nature.com
Asian rice, Oryza sativa is a cultivated, inbreeding species that feeds over half of the world's
population. Understanding the genetic basis of diverse physiological, developmental, and …

Food legumes and rising temperatures: effects, adaptive functional mechanisms specific to reproductive growth stage and strategies to improve heat tolerance

K Sita, A Sehgal, B HanumanthaRao, RM Nair… - Frontiers in Plant …, 2017 - frontiersin.org
Ambient temperatures are predicted to rise in the future owing to several reasons associated
with global climate changes. These temperature increases can result in heat stress-a severe …

Abundance determines the functional role of bacterial phylotypes in complex communities

DW Rivett, T Bell - Nature microbiology, 2018 - nature.com
Bacterial communities are essential for the functioning of the Earth's ecosystems. A key
challenge is to quantify the functional roles of bacterial taxa in nature to understand how the …

Genome-wide association studies in plants: the missing heritability is in the field

B Brachi, GP Morris, JO Borevitz - Genome biology, 2011 - Springer
Genome-wide association studies in plants: the missing heritability is in the field | Genome
Biology Skip to main content SpringerLink Account Menu Find a journal Publish with us …

Adaptation to Climate Across the Arabidopsis thaliana Genome

AM Hancock, B Brachi, N Faure, MW Horton… - Science, 2011 - science.org
Understanding the genetic bases and modes of adaptation to current climatic conditions is
essential to accurately predict responses to future environmental change. We conducted a …

A Map of Local Adaptation in Arabidopsis thaliana

A Fournier-Level, A Korte, MD Cooper, M Nordborg… - Science, 2011 - science.org
Local adaptation is critical for species persistence in the face of rapid environmental change,
but its genetic basis is not well understood. Growing the model plant Arabidopsis thaliana in …