Next generation of network medicine: interdisciplinary signaling approaches
T Korcsmaros, MV Schneider… - Integrative …, 2017 - academic.oup.com
In the last decade, network approaches have transformed our understanding of biological
systems. Network analyses and visualizations have allowed us to identify essential …
systems. Network analyses and visualizations have allowed us to identify essential …
In silico approaches for drug repurposing in oncology: a scoping review
BRR Cavalcante, RD Freitas… - Frontiers in …, 2024 - frontiersin.org
Introduction: Cancer refers to a group of diseases characterized by the uncontrolled growth
and spread of abnormal cells in the body. Due to its complexity, it has been hard to find an …
and spread of abnormal cells in the body. Due to its complexity, it has been hard to find an …
A multi-omics interpretable machine learning model reveals modes of action of small molecules
NL Patel-Murray, M Adam, N Huynh, BT Wassie… - Scientific reports, 2020 - nature.com
High-throughput screening and gene signature analyses frequently identify lead therapeutic
compounds with unknown modes of action (MoAs), and the resulting uncertainties can lead …
compounds with unknown modes of action (MoAs), and the resulting uncertainties can lead …
A framework for considering prior information in network‐based approaches to omics data analysis
For decades, molecular biologists have been uncovering the mechanics of biological
systems. Efforts to bring their findings together have led to the development of multiple …
systems. Efforts to bring their findings together have led to the development of multiple …
HTS-Net: an integrated regulome-interactome approach for establishing network regulation models in high-throughput screenings
C Rioualen, Q Da Costa, B Chetrit, E Charafe-Jauffret… - PLoS …, 2017 - journals.plos.org
High-throughput RNAi screenings (HTS) allow quantifying the impact of the deletion of each
gene in any particular function, from virus-host interactions to cell differentiation. However …
gene in any particular function, from virus-host interactions to cell differentiation. However …
EpiSAFARI: sensitive detection of valleys in epigenetic signals for enhancing annotations of functional elements
Motivation Functional genomics experiments generate genomewide signal profiles that are
dense information sources for annotating the regulatory elements. These profiles measure …
dense information sources for annotating the regulatory elements. These profiles measure …
Machine learning methods for next generation sequencing data: applications to MLL-AF4 leukemia and demographic inference
CB Cole - 2021 - ora.ox.ac.uk
As next generation sequencing technologies continue to mature and find applications
across genomics, it has become clear that the scale and scope of generated data far …
across genomics, it has become clear that the scale and scope of generated data far …
[PDF][PDF] Approches d'intégration de données haut débit sur l'interactome humain.
G Bidaut - 2020 - hal.science
L'analyse de la transcription des gènes à grande échelle est la clé de voûte de la
compréhension de leur fonction et de la fonction des protéines qu'elles traduisent. Elle a …
compréhension de leur fonction et de la fonction des protéines qu'elles traduisent. Elle a …