OncoDB: an interactive online database for analysis of gene expression and viral infection in cancer
Large-scale multi-omics datasets, most prominently from the TCGA consortium, have been
made available to the public for systematic characterization of human cancers. However, to …
made available to the public for systematic characterization of human cancers. However, to …
EWAS Open Platform: integrated data, knowledge and toolkit for epigenome-wide association study
Abstract Epigenome-Wide Association Study (EWAS) has become a standard strategy to
discover DNA methylation variation of different phenotypes. Since 2018, we have developed …
discover DNA methylation variation of different phenotypes. Since 2018, we have developed …
A critical review of datasets and computational suites for improving cancer theranostics and biomarker discovery
Cancer has been constantly evolving and so is the research pertaining to cancer diagnosis
and therapeutic regimens. Early detection and specific therapeutics are the key features of …
and therapeutic regimens. Early detection and specific therapeutics are the key features of …
Krüppel-like factor-9 and Krüppel-like factor-13: highly related, multi-functional, transcriptional repressors and activators of oncogenesis
Simple Summary Krüppel-like Factor-9 (KLF9) and Krüppel-like Factor-13 (KLF13) are
highly related proteins that function as inducers and/or repressors of specific target gene …
highly related proteins that function as inducers and/or repressors of specific target gene …
DNA-methylation signature accurately differentiates pancreatic cancer from chronic pancreatitis in tissue and plasma
Y Wu, I Seufert, FN Al-Shaheri, R Kurilov, AS Bauer… - Gut, 2023 - gut.bmj.com
Objective Pancreatic ductal adenocarcinoma (PDAC) is a lethal malignancy. Differentiation
from chronic pancreatitis (CP) is currently inaccurate in about one-third of cases …
from chronic pancreatitis (CP) is currently inaccurate in about one-third of cases …
ASMdb: a comprehensive database for allele-specific DNA methylation in diverse organisms
Q Zhou, P Guan, Z Zhu, S Cheng, C Zhou… - Nucleic acids …, 2022 - academic.oup.com
DNA methylation is known to be the most stable epigenetic modification and has been
extensively studied in relation to cell differentiation, development, X chromosome …
extensively studied in relation to cell differentiation, development, X chromosome …
MethMarkerDB: a comprehensive cancer DNA methylation biomarker database
Z Zhu, Q Zhou, Y Sun, F Lai, Z Wang… - Nucleic Acids …, 2024 - academic.oup.com
DNA methylation plays a crucial role in tumorigenesis and tumor progression, sparking
substantial interest in the clinical applications of cancer DNA methylation biomarkers …
substantial interest in the clinical applications of cancer DNA methylation biomarkers …
Comprehensive analysis of TLX2 in pan cancer as a prognostic and immunologic biomarker and validation in ovarian cancer
B Chen, X Ding, A Wan, X Qi, X Lin, H Wang, W Mu… - Scientific Reports, 2023 - nature.com
T cell leukemia homeobox 2 (TLX2) plays an important role in some tumors. Bioinformatics
and experimental validation represent a useful way to explore the mechanisms and …
and experimental validation represent a useful way to explore the mechanisms and …
[HTML][HTML] CENPO is associated with immune cell infiltration and is a potential diagnostic and prognostic marker for hepatocellular carcinoma
K He, M Xie, J Li, Y He, Y Yin - International Journal of General …, 2022 - ncbi.nlm.nih.gov
Purpose To examine the expression, clinical significance, and potential regulatory
mechanism of centromere protein O (CENPO) in hepatocellular carcinoma (HCC). Methods …
mechanism of centromere protein O (CENPO) in hepatocellular carcinoma (HCC). Methods …
The effect of benzo [alpha] pyrene on DNA methylation and telomerase activity in human normal and cancer cells
Abstract Benzo [a] pyrene (BaP) exposure has been associated with an increased risk of
carcinogenesis. We investigated the effects of BaP on cell viability, the promoter methylation …
carcinogenesis. We investigated the effects of BaP on cell viability, the promoter methylation …