SeqCode: a nomenclatural code for prokaryotes described from sequence data

BP Hedlund, M Chuvochina, P Hugenholtz… - Nature …, 2022 - nature.com
Most prokaryotes are not available as pure cultures and therefore ineligible for naming
under the rules and recommendations of the International Code of Nomenclature of …

Trace metal availability and the evolution of biogeochemistry

D Giovannelli - Nature Reviews Earth & Environment, 2023 - nature.com
Biogeochemistry is controlled by a small set of microbial-encoded proteins containing redox-
sensitive transition metals as their core catalytic centre. Understanding how the …

Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits

Z Zhou, E St. John, K Anantharaman, AL Reysenbach - Microbiome, 2022 - Springer
Background When deep-sea hydrothermal fluids mix with cold oxygenated fluids, minerals
precipitate out of solution and form hydrothermal deposits. These actively venting deep-sea …

Exploring the nature's discriminating factors behind the selection of molybdoenzymes and tungstoenzymes depending on the biological environment

U Das, A Das, AK Das - Coordination Chemistry Reviews, 2025 - Elsevier
Pterin based molybdenum cofactor found in the molybdenum dependent enzymes catalyzes
the oxo-transferase and hydroxylase activity. For tungsten, the pterin based tungsten …

Genome-guided isolation of the hyperthermophilic aerobe Fervidibacter sacchari reveals conserved polysaccharide metabolism in the Armatimonadota

NO Nou, JK Covington, D Lai, X Mayali… - Nature …, 2024 - nature.com
Few aerobic hyperthermophilic microorganisms degrade polysaccharides. Here, we
describe the genome-enabled enrichment and optical tweezer-based isolation of an aerobic …

The elements of life: A biocentric tour of the periodic table

KA Remick, JD Helmann - Advances in microbial physiology, 2023 - Elsevier
Living systems are built from a small subset of the atomic elements, including the bulk
macronutrients (C, H, N, O, P, S) and ions (Mg, K, Na, Ca) together with a small but variable …

[HTML][HTML] Panguiarchaeum symbiosum, a potential hyperthermophilic symbiont in the TACK superphylum

YN Qu, YZ Rao, YL Qi, YX Li, A Li, M Palmer… - Cell reports, 2023 - cell.com
The biology of Korarchaeia remains elusive due to the lack of genome representatives.
Here, we reconstruct 10 closely related metagenome-assembled genomes from hot spring …

Metabolic versatility of Caldarchaeales from geothermal features of Hawai'i and Chile as revealed by five metagenome-assembled genomes

MG Balbay, MD Shlafstein, C Cockell… - Frontiers in …, 2023 - frontiersin.org
Members of the archaeal order Caldarchaeales (previously the phylum Aigarchaeota) are
poorly sampled and are represented in public databases by relatively few genomes …

Tectonic and geological setting influence hot spring microbiology

DR Colman, A Veach, A Stefánsson… - Environmental …, 2023 - Wiley Online Library
Hydrothermal systems form at divergent and convergent boundaries of lithospheric plates
and within plates due to weakened crust and mantle plumes, playing host to diverse …

Analysis of nearly 3000 archaeal genomes from terrestrial geothermal springs sheds light on interconnected biogeochemical processes

YL Qi, YT Chen, YG Xie, YX Li, YZ Rao, MM Li… - Nature …, 2024 - nature.com
Terrestrial geothermal springs are physicochemically diverse and host abundant
populations of Archaea. However, the diversity, functionality, and geological influences of …