Ribosomal ITS sequences and plant phylogenetic inference

I Álvarez, JF Wendel - Molecular phylogenetics and evolution, 2003 - Elsevier
One of the most popular sequences for phylogenetic inference at the generic and
infrageneric levels in plants is the internal transcribed spacer (ITS) region of the 18S–5.8 S …

Genome evolution in polyploids

JF Wendel - Plant molecular evolution, 2000 - Springer
Polyploidy is a prominent process in plants and has been significant in the evolutionary
history of vertebrates and other eukaryotes. In plants, interdisciplinary approaches …

Evolution of Rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication

Y Xiang, CH Huang, Y Hu, J Wen, S Li… - Molecular biology …, 2017 - academic.oup.com
Fruits are the defining feature of angiosperms, likely have contributed to angiosperm
successes by protecting and dispersing seeds, and provide foods to humans and other …

Paraphyly of Tarasa (Malvaceae) and diverse origins of the polyploid species

JA Tate, BB Simpson - Systematic Botany, 2003 - BioOne
A molecular phylogenetic analysis of the Andean genus Tarasa (Malvaceae) and related
genera yielded unexpected results regarding generic boundaries, the origins of polyploidy …

Linnaeus was right all along: Ulva and Enteromorpha are not distinct genera

HS Hayden, J Blomster, CA Maggs… - European journal of …, 2003 - Taylor & Francis
Ulva, one of the first Linnaean genera, was later circumscribed to consist of green seaweeds
with distromatic blades, and Enteromorpha Link was established for tubular forms. Although …

A multigene phylogeny of the Gibberella fujikuroi species complex: detection of additional phylogenetically distinct species

K O'Donnell, HI Nirenberg, T Aoki, E Cigelnik - Mycoscience, 2000 - Elsevier
Phylogenetic relationships within the Gibberella fujikuroi species complex were extended to
newly discovered strains using nucleotide characters obtained by sequencing polymerase …

Deep reticulation: the long legacy of hybridization in vascular plant evolution

GW Stull, KK Pham, PS Soltis, DE Soltis - The Plant Journal, 2023 - Wiley Online Library
Hybridization has long been recognized as a fundamental evolutionary process in plants
but, until recently, our understanding of its phylogenetic distribution and biological …

Defining coalescent genes: theory meets practice in organelle phylogenomics

JJ Doyle - Systematic biology, 2022 - academic.oup.com
The species tree paradigm that dominates current molecular systematic practice infers
species trees from collections of sequences under assumptions of the multispecies …

Better the devil you know? Guidelines for insightful utilization of nrDNA ITS in species-level evolutionary studies in plants

GN Feliner, JA Rosselló - Molecular phylogenetics and evolution, 2007 - Elsevier
The internal transcribed spacers (ITS) of the nuclear ribosomal 18S–5.8 S–26S cistron
continue to be the most popular non-plastid region for species-level phylogenetic studies of …

Resolving the backbone of the Brassicaceae phylogeny for investigating trait diversity

LA Nikolov, P Shushkov, B Nevado, X Gan… - New …, 2019 - Wiley Online Library
The Brassicaceae family comprises c. 4000 species including economically important crops
and the model plant Arabidopsis thaliana. Despite their importance, the relationships among …