Complexity of the alternative splicing landscape in plants

ASN Reddy, Y Marquez, M Kalyna, A Barta - The Plant Cell, 2013 - academic.oup.com
Alternative splicing (AS) of precursor mRNAs (pre-mRNAs) from multiexon genes allows
organisms to increase their coding potential and regulate gene expression through multiple …

Understanding alternative splicing: towards a cellular code

AJ Matlin, F Clark, CWJ Smith - Nature reviews Molecular cell biology, 2005 - nature.com
In violation of the'one gene, one polypeptide'rule, alternative splicing allows individual
genes to produce multiple protein isoforms—thereby playing a central part in generating …

Alternative splicing landscapes in Arabidopsis thaliana across tissues and stress conditions highlight major functional differences with animals

G Martín, Y Márquez, F Mantica, P Duque, M Irimia - Genome biology, 2021 - Springer
Background Alternative splicing (AS) is a widespread regulatory mechanism in multicellular
organisms. Numerous transcriptomic and single-gene studies in plants have investigated AS …

From single-cell to cell-pool transcriptomes: stochasticity in gene expression and RNA splicing

GK Marinov, BA Williams, K McCue… - Genome …, 2014 - genome.cshlp.org
Single-cell RNA-seq mammalian transcriptome studies are at an early stage in uncovering
cell-to-cell variation in gene expression, transcript processing and editing, and regulatory …

[HTML][HTML] Alternative splicing: new insights from global analyses

BJ Blencowe - Cell, 2006 - cell.com
Recent analyses of sequence and microarray data have suggested that alternative splicing
plays a major role in the generation of proteomic and functional diversity in metazoan …

Transcriptional diversity during lineage commitment of human blood progenitors

L Chen, M Kostadima, JHA Martens, G Canu… - Science, 2014 - science.org
Introduction Blood production in humans culminates in the daily release of around 1011
cells into the circulation, mainly platelets and red blood cells. All blood cells originate from a …

Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis

MA Campbell, BJ Haas, JP Hamilton, SM Mount… - BMC genomics, 2006 - Springer
Background Recently, genomic sequencing efforts were finished for Oryza sativa (cultivated
rice) and Arabidopsis thaliana (Arabidopsis). Additionally, these two plant species have …

A general definition and nomenclature for alternative splicing events

M Sammeth, S Foissac, R Guigó - PLoS computational biology, 2008 - journals.plos.org
Understanding the molecular mechanisms responsible for the regulation of the
transcriptome present in eukaryotic cells is one of the most challenging tasks in the …

Genetics of Crohn disease, an archetypal inflammatory barrier disease

S Schreiber, P Rosenstiel, M Albrecht, J Hampe… - Nature Reviews …, 2005 - nature.com
Chronic inflammatory disorders such as Crohn disease, atopic eczema, asthma and
psoriasis are triggered by hitherto unknown environmental factors that function on the …

Cryptic splicing events in the iron transporter ABCB7 and other key target genes in SF3B1-mutant myelodysplastic syndromes

H Dolatshad, A Pellagatti, FG Liberante, M Llorian… - Leukemia, 2016 - nature.com
The splicing factor SF3B1 is the most frequently mutated gene in myelodysplastic
syndromes (MDS), and is strongly associated with the presence of ring sideroblasts (RS) …