Water as an active constituent in cell biology

P Ball - Chemical reviews, 2008 - ACS Publications
When Szent-Györgyi called water the “matrix of life”, 1 he was echoing an old sentiment.
Paracelsus in the 16th century said that “water was the matrix of the world and of all its …

[HTML][HTML] The role of protein-bound water molecules in microbial rhodopsins

K Gerwert, E Freier, S Wolf - Biochimica et Biophysica Acta (BBA) …, 2014 - Elsevier
Protein-bound internal water molecules are essential features of the structure and function of
microbial rhodopsins. Besides structural stabilization, they act as proton conductors and …

Functional waters in intraprotein proton transfer monitored by FTIR difference spectroscopy

F Garczarek, K Gerwert - Nature, 2006 - nature.com
Much progress has been made in our understanding of water molecule reactions on
surfaces, proton solvation in gas-phase water clusters, and proton transfer through liquids …

Molecular dynamics simulations of proteins in lipid bilayers

J Gumbart, Y Wang, A Aksimentiev… - Current opinion in …, 2005 - Elsevier
With recent advances in X-ray crystallography of membrane proteins promising many new
high-resolution structures, molecular dynamics simulations will become increasingly …

Structures and spectral signatures of protonated water networks in bacteriorhodopsin

G Mathias, D Marx - … of the National Academy of Sciences, 2007 - National Acad Sciences
Networks of internal water molecules are thought to provide proton transfer pathways in
many enzymatic and photosynthetic reactions. Extremely broad absorption continua …

Microbial rhodopsins: scaffolds for ion pumps, channels, and sensors

JP Klare, I Chizhov, M Engelhard - Bioenergetics: Energy Conservation …, 2008 - Springer
Microbial rhodopsins have been intensively researched for the last three decades. Since the
discovery of bacteriorhodopsin, the scope of microbial rhodopsins has been considerably …

What gives an insulin hexamer its unique shape and stability? Role of ten confined water molecules

S Mukherjee, S Mondal, AA Deshmukh… - The Journal of …, 2018 - ACS Publications
Self-assembly of proteins often gives rise to interesting quasi-stable structures that serve
important biological purposes. Insulin hexamer is such an assembly. While monomer is the …

Proton-coupled electron transfer and the role of water molecules in proton pumping by cytochrome c oxidase

V Sharma, G Enkavi, I Vattulainen… - Proceedings of the …, 2015 - National Acad Sciences
Molecular oxygen acts as the terminal electron sink in the respiratory chains of aerobic
organisms. Cytochrome c oxidase in the inner membrane of mitochondria and the plasma …

Microbial rhodopsins

I Gushchin, V Gordeliy - Membrane Protein Complexes: Structure and …, 2018 - Springer
Microbial rhodopsins (MRs) are a large family of photoactive membrane proteins, found in
microorganisms belonging to all kingdoms of life, with new members being constantly …

Key role of active-site water molecules in bacteriorhodopsin proton-transfer reactions

AN Bondar, J Baudry, S Suhai, S Fischer… - The Journal of …, 2008 - ACS Publications
The functional mechanism of the light-driven proton pump protein bacteriorhodopsin
depends on the location of water molecules in the active site at various stages of the …