Selected in situ hybridization methods: principles and application

D Veselinyová, J Mašlanková, K Kalinová, H Mičková… - Molecules, 2021 - mdpi.com
We are experiencing rapid progress in all types of imaging techniques used in the detection
of various numbers and types of mutation. In situ hybridization (ISH) is the primary technique …

[HTML][HTML] Quantitative measurement of cancer tissue biomarkers in the lab and in the clinic

DE Carvajal-Hausdorf, KA Schalper… - Laboratory …, 2015 - Elsevier
Detection of biomolecules in tissues provides contextual information and the possibility to
assess the interaction of different cell types and markers. Routine qualitative assessment of …

A community effort to assess and improve drug sensitivity prediction algorithms

JC Costello, LM Heiser, E Georgii, M Gönen… - Nature …, 2014 - nature.com
Predicting the best treatment strategy from genomic information is a core goal of precision
medicine. Here we focus on predicting drug response based on a cohort of genomic …

[HTML][HTML] Notch—A goldilocks signaling pathway in disease and cancer therapy

EB Braune, U Lendahl - Discovery medicine, 2016 - discoverymedicine.com
The Notch signaling pathway is a fundamental signaling mechanism operating in most, if not
all, multicellular organisms and in most cell types in the body. Like other" ivy league" …

Pathway-enriched gene signature associated with 53BP1 response to PARP inhibition in triple-negative breast cancer

S Hassan, A Esch, T Liby, JW Gray, LM Heiser - Molecular cancer …, 2017 - AACR
Effective treatment of patients with triple-negative (ER-negative, PR-negative, HER2-
negative) breast cancer remains a challenge. Although PARP inhibitors are being evaluated …

Genome-wide siRNA screening reveals several host receptors for the binding of human gut commensal Bifidobacterium bifidum

V Kainulainen, C von Schantz-Fant… - npj Biofilms and …, 2022 - nature.com
Bifidobacterium spp. are abundant gut commensals, especially in breast-fed infants.
Bifidobacteria are associated with many health-promoting effects including maintenance of …

The PI3K/Akt1 pathway enhances steady-state levels of FANCL

KHT Dao, MD Rotelli, BR Brown, JE Yates… - Molecular biology of …, 2013 - Am Soc Cell Biol
Fanconi anemia hematopoietic stem cells display poor self-renewal capacity when
subjected to a variety of cellular stress. This phenotype raises the question of whether the …

Screening of small molecule microarrays for ligands targeted to the extracellular epitopes of living cells

JH Lee, K Bao, JV Frangioni, HS Choi - Microarrays, 2015 - mdpi.com
The screening of living cells using high-throughput microarrays is technically challenging.
Great care must be taken in the chemical presentation of potential ligands and the number of …

Systems biology and genomics

S Hassan, JW Gray, LM Heiser - Holland‐Frei Cancer …, 2016 - Wiley Online Library
Overview Cancers are complex, adaptive systems comprised of cancer cells that are
influenced by supporting cells, immune cells, as well as soluble and insoluble proteins that …

[HTML][HTML] Functional Testing of Urological Cancer Models by RNAi and Drug Libraries

K Saeed - 2018 - helda.helsinki.fi
The thesis addresses the impact of androgen deprivation in combination with gene functions
in prostate cancer (PCa), as well as the development of ex vivo cancer models. The studies …