The molecular basis for cellular function of intrinsically disordered protein regions
AS Holehouse, BB Kragelund - Nature Reviews Molecular Cell Biology, 2024 - nature.com
Intrinsically disordered protein regions exist in a collection of dynamic interconverting
conformations that lack a stable 3D structure. These regions are structurally heterogeneous …
conformations that lack a stable 3D structure. These regions are structurally heterogeneous …
A phase separation model for transcriptional control
Phase-separated multi-molecular assemblies provide a general regulatory mechanism to
compartmentalize biochemical reactions within cells. We propose that a phase separation …
compartmentalize biochemical reactions within cells. We propose that a phase separation …
Mechanisms and consequences of macromolecular phase separation
Over a century ago, colloidal phase separation of matter into non-membranous bodies was
recognized as a fundamental organizing principal of cell" protoplasm." Recent insights into …
recognized as a fundamental organizing principal of cell" protoplasm." Recent insights into …
Functional coordination between transcription factor clustering and gene activity
K Kawasaki, T Fukaya - Molecular Cell, 2023 - cell.com
The prevailing view of metazoan gene regulation is that transcription is facilitated through
the formation of static activator complexes at distal regulatory regions. Here, we employed …
the formation of static activator complexes at distal regulatory regions. Here, we employed …
Visualization of transvection in living Drosophila embryos
How remote enhancers interact with appropriate target genes persists as a central mystery
in gene regulation. Here, we exploit the properties of transvection to explore enhancer …
in gene regulation. Here, we exploit the properties of transvection to explore enhancer …
The RNA methyltransferase complex of WTAP, METTL3, and METTL14 regulates mitotic clonal expansion in adipogenesis
M Kobayashi, M Ohsugi, T Sasako… - … and cellular biology, 2018 - Taylor & Francis
Adipocyte differentiation is regulated by various mechanisms, of which mitotic clonal
expansion (MCE) is a key step. Although this process is known to be regulated by cell cycle …
expansion (MCE) is a key step. Although this process is known to be regulated by cell cycle …
Function determinants of TET proteins: the arrangements of sequence motifs with specific codes
D Liu, G Li, Y Zuo - Briefings in bioinformatics, 2019 - academic.oup.com
The ten-eleven translocation (TET) proteins play a crucial role in promoting locus-specific
reversal of DNA methylation, a type of chromatin modification. Considerable evidences have …
reversal of DNA methylation, a type of chromatin modification. Considerable evidences have …
Identifying molecular features that are associated with biological function of intrinsically disordered protein regions
In previous work, we showed that intrinsically disordered regions (IDRs) of proteins contain
sequence-distributed molecular features that are conserved over evolution, despite little …
sequence-distributed molecular features that are conserved over evolution, despite little …
Side chain to main chain hydrogen bonds stabilize a polyglutamine helix in a transcription factor
Polyglutamine (polyQ) tracts are regions of low sequence complexity frequently found in
transcription factors. Tract length often correlates with transcriptional activity and expansion …
transcription factors. Tract length often correlates with transcriptional activity and expansion …
Low‐pH production of d‐lactic acid using newly isolated acid tolerant yeast Pichia kudriavzevii NG7
HJ Park, JH Bae, HJ Ko, SH Lee… - Biotechnology and …, 2018 - Wiley Online Library
Lactic acid is a platform chemical for the sustainable production of various materials. To
develop a robust yeast platform for low‐pH production of d‐lactic acid (LA), an acid‐tolerant …
develop a robust yeast platform for low‐pH production of d‐lactic acid (LA), an acid‐tolerant …