Ontologies for increasing the FAIRness of plant research data

K Dumschott, H Dörpholz, MA Laporte… - Frontiers in Plant …, 2023 - frontiersin.org
The importance of improving the FAIRness (findability, accessibility, interoperability,
reusability) of research data is undeniable, especially in the face of large, complex datasets …

DataPLAN: a web-based data management plan generator for the plant sciences

XR Zhou, S Beier, D Brilhaus, C Martins Rodrigues… - Data, 2023 - mdpi.com
Research data management (RDM) combines a set of practices for the organization, storage
and preservation of data from research projects. The RDM strategy of a project is usually …

A roadmap for a middleware as a federation service for integrative data retrieval of agricultural data

J García Brizuela, C Scharfenberg… - Journal of Integrative …, 2024 - degruyter.com
Agriculture is confronted with several challenges such as climate change, the loss of
biodiversity and stagnating productivity. The massive increasing amount of data and new …

In‐depth exploration of the genomic diversity in tea varieties based on a newly constructed pangenome of Camellia sinensis

A Tariq, M Meng, X Jiang, A Bolger, S Beier… - The Plant …, 2024 - Wiley Online Library
Tea, one of the most widely consumed beverages globally, exhibits remarkable genomic
diversity in its underlying flavour and health‐related compounds. In this study, we present …

[HTML][HTML] The variegated canalized-1 tomato mutant is linked to photosystem assembly

MW Ahchige, J Fisher, E Sokolowska, R Lyall… - Computational and …, 2024 - Elsevier
The recently described canal-1 tomato mutant, which has a variegated leaf phenotype, has
been shown to affect canalization of yield. The corresponding protein is orthologous to …

Integrating FAIR Experimental Metadata for Multi-omics Data Analysis

G Doniparthi, T Mühlhaus, S Deßloch - Datenbank-Spektrum, 2024 - Springer
The technological advancements in bio-science research are resulting in the generation of
vast amounts of complex and heterogeneous data sets from individual studies. Efficient …

Characterization of tomato canal-1 mutant using a multi-omics approach

MW Ahchige, J Fisher, E Sokolowska, R Lyall, N Illing… - bioRxiv, 2023 - biorxiv.org
The recently described canal-1 tomato mutant, which has a variegated leaf phenotype, has
been shown to affect canalization of yield. The corresponding protein is orthologous to …

[PDF][PDF] DataPLAN: A Web-Based Data Management Plan Generator for the Plant Sciences. Data 2023, 8, 159

XR Zhou, S Beier, D Brilhaus, C Martins Rodrigues… - 2023 - juser.fz-juelich.de
Research data management (RDM) combines a set of practices for the organization, storage
and preservation of data from research projects. The RDM strategy of a project is usually …

Confidentiality. Integrity, and Availability (CIA) Approach for Private Dataset Management System Design

M Isnan, GN Elwirehardja, D Ariansyah… - 2024 9th …, 2024 - ieeexplore.ieee.org
Dataset management systems are essential for assisting research and development (R&D)
organizations in applying data governance protocols, especially in managing the utilization …

Accelerating research through community open source software for a standardized file format to improve process representation in numerical weather prediction …

J Tjernström, M Gallagher, J Holt… - …, 2024 - egusphere.copernicus.org
Improvements in process representation in numerical weather prediction (NWP) models
requires informed collaboration between scientists making research-grade observations and …