How to proceed after “negative” exome: A review on genetic diagnostics, limitations, challenges, and emerging new multiomics techniques

SB Wortmann, MM Oud, M Alders… - Journal of Inherited …, 2022 - Wiley Online Library
Exome sequencing (ES) in the clinical setting of inborn metabolic diseases (IMDs) has
created tremendous improvement in achieving an accurate and timely molecular diagnosis …

Mitochondrial biology and dysfunction in secondary mitochondrial disease

MJ Baker, JJ Crameri, DR Thorburn… - Open …, 2022 - royalsocietypublishing.org
Mitochondrial diseases are a broad, genetically heterogeneous class of metabolic disorders
characterized by deficits in oxidative phosphorylation (OXPHOS). Primary mitochondrial …

HAX1-dependent control of mitochondrial proteostasis governs neutrophil granulocyte differentiation

Y Fan, M Murgia, MI Linder… - The Journal of …, 2022 - Am Soc Clin Investig
The relevance of molecular mechanisms governing mitochondrial proteostasis to the
differentiation and function of hematopoietic and immune cells is largely elusive. Through …

Premature ovarian insufficiency in CLPB deficiency: Transcriptomic, proteomic and phenotypic insights

EJ Tucker, MJ Baker, DH Hock… - The Journal of …, 2022 - academic.oup.com
Context Premature ovarian insufficiency (POI) is a common form of female infertility that
usually presents as an isolated condition but can be part of various genetic syndromes …

CLPB disaggregase dysfunction impacts the functional integrity of the proteolytic SPY complex

MJ Baker, KU Blau, AJ Anderson, CS Palmer… - Journal of Cell …, 2024 - rupress.org
CLPB is a mitochondrial intermembrane space AAA+ domain–containing disaggregase.
CLPB mutations are associated with 3-methylglutaconic aciduria and neutropenia; however …

Complexome profiling—exploring mitochondrial protein complexes in health and disease

A Cabrera-Orefice, A Potter, F Evers… - Frontiers in Cell and …, 2022 - frontiersin.org
Complexome profiling (CP) is a state-of-the-art approach that combines separation of native
proteins by electrophoresis, size exclusion chromatography or density gradient …

Comprehensive structural characterization of the human AAA+ disaggregase CLPB in the apo-and substrate-bound states reveals a unique mode of action driven by …

D Wu, Y Liu, Y Dai, G Wang, G Lu, Y Chen, N Li… - PLoS …, 2023 - journals.plos.org
The human AAA+ ATPase CLPB (SKD3) is a protein disaggregase in the mitochondrial
intermembrane space (IMS) and functions to promote the solubilization of various …

The Bacterial ClpXP-ClpB Family Is Enriched with RNA-Binding Protein Complexes

G Auburger, J Key, S Gispert - Cells, 2022 - mdpi.com
In the matrix of bacteria/mitochondria/chloroplasts, Lon acts as the degradation machine for
soluble proteins. In stress periods, however, proteostasis and survival depend on the …

[HTML][HTML] Unique structural features govern the activity of a human mitochondrial AAA+ disaggregase, Skd3

RR Cupo, AN Rizo, GA Braun, E Tse, E Chuang… - Cell reports, 2022 - cell.com
Summary The AAA+ protein, Skd3 (human CLPB), solubilizes proteins in the mitochondrial
intermembrane space, which is critical for human health. Skd3 variants with defective protein …

Let's make it clear: systematic exploration of mitochondrial DNA–and RNA–protein complexes by complexome profiling

A Potter, A Cabrera-Orefice… - Nucleic Acids …, 2023 - academic.oup.com
Complexome profiling (CP) is a powerful tool for systematic investigation of protein
interactors that has been primarily applied to study the composition and dynamics of …