Next-generation sequencing in oncology: genetic diagnosis, risk prediction and cancer classification
R Kamps, RD Brandão, BJ van den Bosch… - International journal of …, 2017 - mdpi.com
Next-generation sequencing (NGS) technology has expanded in the last decades with
significant improvements in the reliability, sequencing chemistry, pipeline analyses, data …
significant improvements in the reliability, sequencing chemistry, pipeline analyses, data …
[HTML][HTML] Classifying the evolutionary and ecological features of neoplasms
Neoplasms change over time through a process of cell-level evolution, driven by genetic
and epigenetic alterations. However, the ecology of the microenvironment of a neoplastic …
and epigenetic alterations. However, the ecology of the microenvironment of a neoplastic …
High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing
High-throughput amplicon sequencing of large genomic regions remains challenging for
short-read technologies. Here, we report a high-throughput amplicon sequencing approach …
short-read technologies. Here, we report a high-throughput amplicon sequencing approach …
Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes
Intra-tumor heterogeneity (ITH) is a mechanism of therapeutic resistance and therefore an
important clinical challenge. However, the extent, origin, and drivers of ITH across cancer …
important clinical challenge. However, the extent, origin, and drivers of ITH across cancer …
Intratumor heterogeneity in localized lung adenocarcinomas delineated by multiregion sequencing
Cancers are composed of populations of cells with distinct molecular and phenotypic
features, a phenomenon termed intratumor heterogeneity (ITH). ITH in lung cancers has not …
features, a phenomenon termed intratumor heterogeneity (ITH). ITH in lung cancers has not …
Clinical and biological implications of driver mutations in myelodysplastic syndromes
E Papaemmanuil, M Gerstung… - Blood, The Journal …, 2013 - ashpublications.org
Myelodysplastic syndromes (MDS) are a heterogeneous group of chronic hematological
malignancies characterized by dysplasia, ineffective hematopoiesis and a variable risk of …
malignancies characterized by dysplasia, ineffective hematopoiesis and a variable risk of …
Tumor evolution: Linear, branching, neutral or punctuated?
Intratumor heterogeneity has been widely reported in human cancers, but our knowledge of
how this genetic diversity emerges over time remains limited. A central challenge in studying …
how this genetic diversity emerges over time remains limited. A central challenge in studying …
Limited heterogeneity of known driver gene mutations among the metastases of individual patients with pancreatic cancer
The extent of heterogeneity among driver gene mutations present in naturally occurring
metastases—that is, treatment-naive metastatic disease—is largely unknown. To address …
metastases—that is, treatment-naive metastatic disease—is largely unknown. To address …
Intratumor heterogeneity and branched evolution revealed by multiregion sequencing
M Gerlinger, AJ Rowan, S Horswell… - New England journal …, 2012 - Mass Medical Soc
Background Intratumor heterogeneity may foster tumor evolution and adaptation and hinder
personalized-medicine strategies that depend on results from single tumor-biopsy samples …
personalized-medicine strategies that depend on results from single tumor-biopsy samples …
[HTML][HTML] Intratumor and intertumor heterogeneity in melanoma
Melanoma is a cancer that exhibits one of the most aggressive and heterogeneous features.
The incidence rate escalates. A high number of clones harboring various mutations …
The incidence rate escalates. A high number of clones harboring various mutations …