A survey of topological machine learning methods

F Hensel, M Moor, B Rieck - Frontiers in Artificial Intelligence, 2021 - frontiersin.org
The last decade saw an enormous boost in the field of computational topology: methods and
concepts from algebraic and differential topology, formerly confined to the realm of pure …

An introduction to multiparameter persistence

MB Botnan, M Lesnick - arXiv preprint arXiv:2203.14289, 2022 - arxiv.org
In topological data analysis (TDA), one often studies the shape of data by constructing a
filtered topological space, whose structure is then examined using persistent homology …

[图书][B] Computational topology for data analysis

TK Dey, Y Wang - 2022 - books.google.com
" In this chapter, we introduce some of the very basics that are used throughout the book.
First, we give the definition of a topological space and related notions of open and closed …

[PDF][PDF] Statistical topological data analysis using persistence landscapes.

P Bubenik - J. Mach. Learn. Res., 2015 - jmlr.org
We define a new topological summary for data that we call the persistence landscape. Since
this summary lies in a vector space, it is easy to combine with tools from statistics and …

TopologyNet: Topology based deep convolutional and multi-task neural networks for biomolecular property predictions

Z Cang, GW Wei - PLoS computational biology, 2017 - journals.plos.org
Although deep learning approaches have had tremendous success in image, video and
audio processing, computer vision, and speech recognition, their applications to three …

[图书][B] Computational topology: an introduction

H Edelsbrunner, JL Harer - 2022 - books.google.com
Combining concepts from topology and algorithms, this book delivers what its title promises:
an introduction to the field of computational topology. Starting with motivating problems in …

Perslay: A neural network layer for persistence diagrams and new graph topological signatures

M Carrière, F Chazal, Y Ike… - International …, 2020 - proceedings.mlr.press
Persistence diagrams, the most common descriptors of Topological Data Analysis, encode
topological properties of data and have already proved pivotal in many different applications …

[图书][B] The structure and stability of persistence modules

F Chazal, V De Silva, M Glisse, S Oudot - 2016 - Springer
Our intention, at the beginning, was to write a short paper resolving some technical issues in
the theory of topological persistence. Specifically, we wished to present a clean easy-to-use …

Representability of algebraic topology for biomolecules in machine learning based scoring and virtual screening

Z Cang, L Mu, GW Wei - PLoS computational biology, 2018 - journals.plos.org
This work introduces a number of algebraic topology approaches, including multi-
component persistent homology, multi-level persistent homology, and electrostatic …

Persistent homology-a survey

H Edelsbrunner, J Harer - Contemporary mathematics, 2008 - books.google.com
Persistent homology is an algebraic tool for measuring topological features of shapes and
functions. It casts the multi-scale organization we frequently observe in nature into a …