[HTML][HTML] DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
Effective identification of species using short DNA fragments (DNA barcoding and DNA
metabarcoding) requires reliable sequence reference libraries of known taxa. Both …
metabarcoding) requires reliable sequence reference libraries of known taxa. Both …
Implementation options for DNA-based identification into ecological status assessment under the European Water Framework Directive
Assessment of ecological status for the European Water Framework Directive (WFD) is
based on “Biological Quality Elements”(BQEs), namely phytoplankton, benthic flora, benthic …
based on “Biological Quality Elements”(BQEs), namely phytoplankton, benthic flora, benthic …
Delimiting species using single-locus data and the Generalized Mixed Yule Coalescent approach: a revised method and evaluation on simulated data sets
T Fujisawa, TG Barraclough - Systematic biology, 2013 - academic.oup.com
DNA barcoding-type studies assemble single-locus data from large samples of individuals
and species, and have provided new kinds of data for evolutionary surveys of diversity. An …
and species, and have provided new kinds of data for evolutionary surveys of diversity. An …
A re‐analysis of the data in Sharkey et al.'s (2021) minimalist revision reveals that BINs do not deserve names, but BOLD Systems needs a stronger commitment to …
Halting biodiversity decline is one of the most critical challenges for humanity, but monitoring
biodiversity is hampered by taxonomic impediments. One impediment is the large number of …
biodiversity is hampered by taxonomic impediments. One impediment is the large number of …
Towards large-scale integrative taxonomy (LIT): resolving the data conundrum for dark taxa
Abstract New, rapid, accurate, scalable, and cost-effective species discovery and
delimitation methods are needed for tackling “dark taxa,” here defined as groups for which …
delimitation methods are needed for tackling “dark taxa,” here defined as groups for which …
Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects barcoding accuracy of its freshwater fishes
Incomplete knowledge of biodiversity remains a stumbling block for conservation planning
and even occurs within globally important Biodiversity Hotspots (BH). Although technical …
and even occurs within globally important Biodiversity Hotspots (BH). Although technical …
DNA-based species delimitation in algae
F Leliaert, H Verbruggen… - European journal of …, 2014 - Taylor & Francis
Given the problems of species delimitation in algae using morphology or sexual
compatibility, molecular data are becoming the standard for delimiting species and testing …
compatibility, molecular data are becoming the standard for delimiting species and testing …
Improving metabarcoding taxonomic assignment: A case study of fishes in a large marine ecosystem
DNA metabarcoding is an important tool for molecular ecology. However, its effectiveness
hinges on the quality of reference sequence databases and classification parameters …
hinges on the quality of reference sequence databases and classification parameters …
Factors affecting species delimitations with the GMYC model: insights from a butterfly survey
The generalized mixed Yule‐coalescent (GMYC) model has become one of the most
popular approaches for species delimitation based on single‐locus data, and it is widely …
popular approaches for species delimitation based on single‐locus data, and it is widely …
Guidelines for DNA taxonomy, with a focus on the meiofauna
Describing biological diversity is a challenging endeavour, especially for the small, cryptic
animals that make up the meiofauna. The field of DNA taxonomy, ie, the use of DNA to …
animals that make up the meiofauna. The field of DNA taxonomy, ie, the use of DNA to …