[HTML][HTML] Data integration challenges for machine learning in precision medicine
M Martínez-García, E Hernández-Lemus - Frontiers in medicine, 2022 - frontiersin.org
A main goal of Precision Medicine is that of incorporating and integrating the vast corpora on
different databases about the molecular and environmental origins of disease, into analytic …
different databases about the molecular and environmental origins of disease, into analytic …
Knowledge graphs for the life sciences: Recent developments, challenges and opportunities
The term life sciences refers to the disciplines that study living organisms and life processes,
and include chemistry, biology, medicine, and a range of other related disciplines. Research …
and include chemistry, biology, medicine, and a range of other related disciplines. Research …
Understanding geological reports based on knowledge graphs using a deep learning approach
Geological reports aid in understanding exploration by providing valuable information on
rock formation, evolution and the geological environment in which deposits formed …
rock formation, evolution and the geological environment in which deposits formed …
Comparison of biomedical relationship extraction methods and models for knowledge graph creation
N Milošević, W Thielemann - Journal of Web Semantics, 2023 - Elsevier
Biomedical research is growing at such an exponential pace that scientists, researchers,
and practitioners are no more able to cope with the amount of published literature in the …
and practitioners are no more able to cope with the amount of published literature in the …
Hierarchical representation and deep learning–based method for automatically transforming textual building codes into semantic computable requirements
R Zhang, N El-Gohary - Journal of Computing in Civil Engineering, 2022 - ascelibrary.org
Most of the existing automated compliance checking (ACC) systems are unable to fully
automatically convert building-code requirements, especially requirements that have …
automatically convert building-code requirements, especially requirements that have …
[HTML][HTML] Relation extraction for biological pathway construction using node2vec
Background Systems biology is an important field for understanding whole biological
mechanisms composed of interactions between biological components. One approach for …
mechanisms composed of interactions between biological components. One approach for …
[HTML][HTML] Deep learning with sentence embeddings pre-trained on biomedical corpora improves the performance of finding similar sentences in electronic medical …
Background Capturing sentence semantics plays a vital role in a range of text mining
applications. Despite continuous efforts on the development of related datasets and models …
applications. Despite continuous efforts on the development of related datasets and models …
Models and techniques for domain relation extraction: a survey
J Wang, K Yue, L Duan - Journal of Data Science and …, 2023 - ojs.bonviewpress.com
As the significant subtask of information extraction, relation extraction (RE) aims to identify
and classify semantic relations between pairs of entities and is widely adopted as the …
and classify semantic relations between pairs of entities and is widely adopted as the …
[HTML][HTML] Joint learning-based causal relation extraction from biomedical literature
Causal relation extraction of biomedical entities is one of the most complex tasks in
biomedical text mining, which involves two kinds of information: entity relations and entity …
biomedical text mining, which involves two kinds of information: entity relations and entity …
BEL Commons: an environment for exploration and analysis of networks encoded in Biological Expression Language
CT Hoyt, D Domingo-Fernández… - Database, 2018 - academic.oup.com
The rapid accumulation of knowledge in the field of systems and networks biology during
recent years requires complex, but user-friendly and accessible web applications that allow …
recent years requires complex, but user-friendly and accessible web applications that allow …